Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01368 ATGGAACAGAAACACGTTCTGTTGTCAGCATTGAGTGTTGGGGTTGGGTTAGGTGTGGGGCTTGGGTTGAGTTCAGGGCAGAAATGGGTTGGCGGGAATCGTGACTCTGATGAGATTTCCATGGAGCAGATTGTGCAGGAGCTCAGGAGGCTGGTGGTTGAAGGAAGGGACGGAAAGTGTACATTTGAGGAGTTTCCATATTACTTAAGTGAAAGAATTCGAATTTTGTTGACAAGTGCTGCATATATTCATTTGAAACATCTTCACTTTTCCAAGCACACCAGGAACCTCTCGCCAGGAAGCAGGGCTATTTTGCTATCTGGTCCAGCAGAATCTTATCAGCAAGCCCTTGCCAGAGCTTTAGCTCATTACTTTGAATCAAAGCTGCTGTTGTTAGATATTACTGACTTCTCTGTGAAGTTGCAGAACAAATTTGGATGTTCCAGAAAAGAAACATGTTTGAAAAGGTCAATCTCGGAGGCAACCTTGGAGACAATGTCTGCTTTGTTTGGTTCCTTTTCAATGCTTTCTTCAGCTGGAGAATCAAGAGGAATTGTGCGTCAACAAAGCAGTGCTACTATAAGTTCCAATCTTCCAAAGCTTAAGAGGAATGCTTCTGCTGCATCTGATATAAGTAGCACTGCTTCCCAGTGTGGTCCAACATTTCCAGCACGTTTGAAGCGCACAAGTAGCTTGTGTTTTGATGAGAAGCTCTTTGTGCAGGCACTTTATAAGCTTTTGGTTTCTTTCTCAGAAACTAGTTCCATCATTTTATACATAAGGGATGTTGAGAAGCTCCTTCTTCAGTCAAGGTTATATAATTTACTACAAAAAATGATAAATAAACTATCAGGCTCGGTGTTGATACTTGGGTCCCAGATATTAGATTCAGATGACGATTGCAAAGAAGTTGATGAAAGACTCACTGCGTTATTCCCCTACAACATTGAGATCAAAGCTCCTGAAGATGAAACTCACTCTGGCAATTGGAAAGGATCACTGGAAGACGATATGAAAGCTATTCAGTTCCAAGACAACAGAAACCACATTGCTGAAGTACTAGCAGCAAATGACATTGACTGTGATGACTTGAACTCAGTCTGCTTTTCAGATACTATCTTACTCAGCAATTATATTGAAGAAATTGTAGTATCTGCAATATCTTACCATTTGATGAAAACCAAGGATCCAGAATACCGAAATGGAAAGTTAGTTATATCAGCCAATAGTTTGTCCCATGGATTGAGTCTGTTCCAGGAAGGCAAGAGTAGTGGGAATCTGAAGACTAATGAATCTAACAAGGAAAATGCTGGGGAAGATATTTCTGGTGCAAAGAATGAAGTTAAGTCTGACAATCAAGCACCCGAAAACAAGAATGAGGCAGAGAAATCCATCCCGGTAACAAAGAAAGATGGCGAAAATCCTGCACCTTCCAAAGCGGAAGTTCCTGACAACGAGTTTGAGAAGCGCATAAGACCTGAGGTTATCCCTGCAAATGAGATAGGGGTTACATTTGCAGATATTGGTGCATTGGATGAGATCAAAGAGTCACTTCAAGAGCTGGTAATGCTTCCCCTTAGAAGGCCTGACCTCTTCAAAGGTGGGCTTCTAAAGCCGTGTAGAGGTATATTGCTTTTTGGGCCTCCTGGTACTGGGAAAACAATGCTAGCAAAAGCCATTGCAAATGAAGCTGGTGCAAGTTTCATTAATGTCTCAATGTCAACTATTACATCAAAGTGGTTTGGAGAAGATGAAAAGAACGTCCGAGCTCTATTCACACTGGCAGCTAAGGTTTCTCCAACAATCATCTTTGTTGACGAGGTTGACAGCATGCTTGGACAGAGGACTAGAGTAGGAGAGCATGAGGCCATGAGGAAGATAAAAAATGAGTTCATGACACATTGGGATGGGCTATTAACAGGACCTAATGAGCAAATTTTGGTTCTCGCTGCAACCAACAGACCATTTGACCTTGATGAAGCTATTATCAGACGATTTGAACGCAGGGTCCTGGTTGGTCTTCCATCTGCTGAGAACAGGGAAATGATCTTGAAGACTCTTCTGGCTAAAGAAAAACATGAAAACTTAGACTTCAAAGAGCTGGCAACCATGACAGAAGGATATACTGGAAGTGATCTTAAGAATTTGTGCATCACTGCGGCTTATCGACCTGTTAGAGAGCTAATACAGCGGGAGAGAATGAAGGAAATGGAAAAGAAGAAAAGAGAGGCTGAAGGCCAAAACTCTGAAGATGCTTCAAACAATAAAGATAAGGAAGACCAAGAGATTACCCTCAGGCCTTTGAATATGGAAGACATGAAGCAGGCTAAGAGTCAGGTGGCTGCAAGTTTTGCATCAGAAGGATCCGTAATGAATGAGTTGAAGCAGTGGAATGATTTATATGGAGAAGGAGGTTCAAGGAAGAAGCAACAACTCACTTACTTCCTTTAG 2451 0.419 MEQKHVLLSALSVGVGLGVGLGLSSGQKWVGGNRDSDEISMEQIVQELRRLVVEGRDGKCTFEEFPYYLSERIRILLTSAAYIHLKHLHFSKHTRNLSPGSRAILLSGPAESYQQALARALAHYFESKLLLLDITDFSVKLQNKFGCSRKETCLKRSISEATLETMSALFGSFSMLSSAGESRGIVRQQSSATISSNLPKLKRNASAASDISSTASQCGPTFPARLKRTSSLCFDEKLFVQALYKLLVSFSETSSIILYIRDVEKLLLQSRLYNLLQKMINKLSGSVLILGSQILDSDDDCKEVDERLTALFPYNIEIKAPEDETHSGNWKGSLEDDMKAIQFQDNRNHIAEVLAANDIDCDDLNSVCFSDTILLSNYIEEIVVSAISYHLMKTKDPEYRNGKLVISANSLSHGLSLFQEGKSSGNLKTNESNKENAGEDISGAKNEVKSDNQAPENKNEAEKSIPVTKKDGENPAPSKAEVPDNEFEKRIRPEVIPANEIGVTFADIGALDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTGPNEQILVLAATNRPFDLDEAIIRRFERRVLVGLPSAENREMILKTLLAKEKHENLDFKELATMTEGYTGSDLKNLCITAAYRPVRELIQRERMKEMEKKKREAEGQNSEDASNNKDKEDQEITLRPLNMEDMKQAKSQVAASFASEGSVMNELKQWNDLYGEGGSRKKQQLTYFL* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01368 816 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 502 677 - -
Phac4g01368 816 Gene3D - 675 778 - -
Phac4g01368 816 MobiDBLite consensus disorder prediction 421 485 - -
Phac4g01368 816 Pfam ATPase family associated with various cellular activities (AAA) 543 673 IPR003959 GO:0005524|GO:0016887
Phac4g01368 816 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 502 736 IPR027417 -
Phac4g01368 816 Gene3D - 502 784 IPR027417 -
Phac4g01368 816 MobiDBLite consensus disorder prediction 433 485 - -
Phac4g01368 816 SMART AAA_5 539 676 IPR003593 GO:0016887
Phac4g01368 816 Coils Coil 727 754 - -
Phac4g01368 816 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 41 815 - -
Phac4g01368 816 Pfam AAA+ lid domain 695 739 IPR041569 -
Phac4g01368 816 MobiDBLite consensus disorder prediction 735 761 - -
Phac4g01368 816 ProSitePatterns AAA-protein family signature. 646 665 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01368 Phac-Chr4 35152270 35159553 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01368 503 734 Calmodulin-binding Proteins AT3G56690 38.983 1.13e-41 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01368 - - gmx:100817952 1429.08