Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01354 ATGTTTGCAGAGGATGTGTTCATAAGTAATCTATCCACGCCATCGCTACTTTCAGAGGAAAGCACTTTTGTTATCTTAGCTACAATAAAACATATTGTAGCTGATGAAGATTGGTGGTACAAAGCTTGCTTATACGGTAAAGTTGTTTACCCGGATTCCAAAATGTTTTTTTGTGAGAAATGTAACAAACATGTTATCAAAGTCCAACAGAGGTATAAGTTGAAGTTGCGAGTGATTGATGAAACGGATTCCACTACTTTCGTTTTATTTGACAAGGATGCCAGTACACTGATCAATAAATCTTGCGCCGAATTATTTGAAAAACGGTGA 330 0.3636 MFAEDVFISNLSTPSLLSEESTFVILATIKHIVADEDWWYKACLYGKVVYPDSKMFFCEKCNKHVIKVQQRYKLKLRVIDETDSTTFVLFDKDASTLINKSCAELFEKR* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01354 109 Pfam Replication factor-A C terminal domain 23 107 IPR013955 -
Phac4g01354 109 SUPERFAMILY Nucleic acid-binding proteins 18 108 IPR012340 -
Phac4g01354 109 Gene3D - 3 109 IPR012340 -
Phac4g01354 109 CDD RPA1_DBD_C 12 109 IPR047192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01354 Phac-Chr4 34692646 34696708 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01354 1 99 Core DNA Replication Machinery Family AT5G08020 32.039 3.00e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01354 - - pvu:PHAVU_007G143500g 164.081