Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01315 ATGTCAGATCAATTGCCTTTCCATTATGTGGAAATTTCAAGACTTCTTTTTGATCATGCACGTGATAACATTCCCAATTTATATATGGTGAGATCTCTAATTGAGGATATAAGAAATGTAAGGTTTCATAAAGTTGAAACAGACTTGGAAGGATTTAATGGTCGTACAATTGCTGTTAAGATAAAAAATTTGTCTGCAATGGAAGTGAATATTGTTCGTCCATTTATTGGAAAAGCTTTACAAGCATTTTATAAGCATGATAGTCCAGAGTTGATACCAGACCCTGAGAGAGTTTCAGATAGGAGACCCCAAGTTGTCAACAATGCCCCTAGAAGACAACTTCGACGATAG 351 0.3561 MSDQLPFHYVEISRLLFDHARDNIPNLYMVRSLIEDIRNVRFHKVETDLEGFNGRTIAVKIKNLSAMEVNIVRPFIGKALQAFYKHDSPELIPDPERVSDRRPQVVNNAPRRQLRR* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01315 116 FunFam DNA replication complex GINS protein PSF2 1 99 - -
Phac4g01315 116 SUPERFAMILY GINS helical bundle-like 4 87 IPR036224 -
Phac4g01315 116 Gene3D - 1 92 - -
Phac4g01315 116 MobiDBLite consensus disorder prediction 93 116 - -
Phac4g01315 116 Pfam GINS complex protein 4 68 IPR021151 -
Phac4g01315 116 CDD GINS_A_psf2 4 88 - -
Phac4g01315 116 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 4 110 IPR007257 GO:0005634|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01315 Phac-Chr4 33078837 33080771 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01315 5 53 Core DNA Replication Machinery Family AT3G12530 73.469 1.22e-21 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01315 K10733 - gmx:100780528 228.024