Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01297 ATGATGGAGGACTTTTGGAGCATGGTTTGTGGAGAATCTGATTGTCCTGGGAATGGAGTAAAACCACCTTTCTGTTACGATATCAAGTTTTTGAAAGATCCTTCTACGTGCACCTATCAGTTCTTGGTTATCTGCTTTGATGTTTTGCTACTGATCATGCTAGCATTCATTTTGATCCAGAAGTCTTTGTTCAAACCATTTCGTGATCAGCTTCAGGTGGAAAGATATTCAAACTTGCAGCTAGTTTCTGCCATAACCAATGGTTTTCTGGGGTTGTTGTATGTGTGCTTAGGCATTTGGGTTTTAGAGGAGGAATTAAGAAAGAGACACACTTTCTTCCCTCTTAAGTTGTGGTTGCCAGAGCTTTTTCAAGGATTCAGATGGTTGTTAGTAGGCCTAAGTGTAAGTCTACAGTTGAAACAACTTCCAAGATCATGGTTGTGGTTGTTTTCTCTTCTTACGTTATTTGTTTCTATTATTTTCTGTATTCTATCCATCTGTCACGCAATTAGTAGCAGAAAATTGACCTTCAAGGAAGCTCTAGATTTTCTGTCTTTTCCAGGGTCAGTTTTACTACTCTTGTGTACTTACAAAGTATATAAATGTGAAGATACTGATAGAGAAATTGATGAAGGCCTTTACCACCCTTTGAATGGTCAATTTAGTGAAGTTGATCCAGATAATTATGTGACTCCATTTGCCAAAGCTGGATTCCTTAGTAAGATGTCATTTTGGTGGTTGAATCCATTGATGAAAGGGGGTCAAGAGAAAACACTTCAGGATGAGGATATCCCGAAGTTGCGAGAATCAGATCGAACAGAAAGTTGCTATTTGTCATATTTAGAACGTTTGAACAGGGAAAAGGGAAAAGATCCATTATCACAATCAACAGTTTTGTGGACCATAGTCTGGTGCCACAGGAGAGAGATTTTGGTGACTGGATTCTTTGCTTTGCTCAAGGTACTCACCCTGTCAACTGGTCCTGTACTTCTGAATGCTTTTATATTGGTTTCTGAGGGTAATGGAAGCTTCAAATATGAGGGTTATGTATTGGTCGTATCACTTTTCATCATAAAGATCATAGAGTCCCTGTCCCAAAGGCAGTGGTATTTCCGTAGTAGGCTTGTTGGAATGAAAGTTAGATCATTACTTACTGCAGCAATTTATAAAAAAATATTGAGGTTGTCAAGTGCAGCTAGATTGACACACTCGAGTGGTGAGATAATGAATTATGTGACTGTGGACGCTTACAGAATTGGAGAATTTCCATATTGGTTTCACCAGTTGTGGACAACAAGCCTCCAAATATGTATTGCTGTAGTAATACTTTTTCATGCTATTGGGATAGCAACAATATCCTCATTGGTAGTGATAGTCTTCACTGTGCTTTGCAACGTTCCCCTAGCAAAGTTGCAGCATGAGTTTCAGAGCAAACTCATGGTGGCACAAGATGAGCGATTGAAGGCGAGTTCTGAGGCTCTTACAAATATGAAAGTCCTGAAGCTGTATGCATGGGAAACTCATTTTAAAAATGCTATAGAAAGACTAAGAAGTTTGGAACTGAAAATTTTACGTTCAGTGCAATTGAGAAAGGCTTACAACATCTTTCTATTTTGGACCTCACCAATTTTGGTCTCTGCTGCTTCTTTTGGGACATGCTACTTCTTGAATATTCCTTTGCACGCAAATAATCTTTTCACATTTGTGGCGACTATACGTCTTGTGCAGGAGCCAATTACAGGCATCCCAGATGTTATTGGGGTGGTCATTCAAGCAAAAGTAGCATTTTTCCGGATTGTTCAATTCCTTAATGCACCTGAATTGCAAAGTGAAAATTTCAGGGATAAAAGTTTTGATGGCAGTAAAGGGTCAATTACAATCAAATCTGCTGACTTTTCATGGGAAGGTAATGTATCGAAGTCAACACTAAGGAGGATAAACTTGGAGATTGGACATGGGCAAAAGCTTGCTATTTGTGGAGAAGTTGGCTCAGGCAAATCAACCCTCTTAGCTACAATTCTTGGAGAGGTTCCTATGATAAAAGGAACTATTGAAGTTCATGGAAAGTTTGCATATGTTTCTCAAACAGCATGGATACAGACAGGCACTATACGGGAAAATATTTTGTTTGGATCAAATTTGGATGCTCATAGATATGAAGGAACACTTCGTAGATCATCACTACTAAAGGATTTGGAGCTGTTTCCCCACGGAGATCTCACACAAATAGGTGAGAGAGGAGTTAACTTGAGTGGAGGCCAGAAGCAGCGAATTCAACTTGCGCGTGCTCTTTATCAGAATGCTGATGTATATCTTTTGGATGATCCATTTAGTGCTGTTGATGCACATACTGCCACAAGTTTGTTTAATGAGTACATCATGGATGGTCTGAAAGAGAAAACTGTTTTACTCGTGACTCATCAAGTTGACTTTCTACCAGCGTTTGATTCTGTTTTGTTGATGTCAAATGGGGAAATCCTAGAATCTGCTCCTTATCATCATTTGTTGTCCTCAAGCCAAGAATTCCAAGATCTTGTTAATGCTCACAAGAAAACTGCTGGTTCTGACAAGCCTATGAATGCTTCTTCTTCCAAGAGGCCTTTAATATCTGCTAAAGAGATTACACAAGCTTTCAAGGAGAAACAATTAGATGCCACAAATGGAAATCAGTTAATAAAGGAAGAGGAGAGAGAGATAGGAGACACGGGGTTGAAGCCTTACTTTCAGTATTTGAATCAGAAGAAAGGCTATATTTACTTCTTTGTGACTTCTCTTTGTCACCTCTTGTTTGTCATTTGCCAGATATTGCAAAACTCATGGATGGCTGCTAATGTTGACAGTTTCCAAGTTAGCACATTGCGGCTGATTGTTGTTTACTTCATGATTGGGGCTGTTTCTACTGTTTTCTTACTGATCAGAACTCTACTTCTTGTTGCCTTGGGTATTCAATCATCAAAATATCTATTTTTACAGTTAATGAACTCCCTTTTTTGTGCACCGATGTCCTTTTATGACTCTACACCATTGGGAAGAATACTTAGTCGGGTCTCATCAGATTTAAGCATTATGGATATTGATATCCCTTTTATTATTGCTTATACTGTGGGAGGTACTACAAACTTCTATACTAACCTCACAGTTTTAGCAATTATCACTTGGCAAATCTTGTTTATCGCTGTACCGATGCTTTACATTGCAATACGCTTGCAGAGATACTACTTTTCCACTGCAAAAGAAGTGATGCGGATGAATGGCACAACAAAGTCATTGGTAGCTAATCATGTAGCTGAAACTACTGCTGGAGTTATGACGATAAGAGCCTTTGAAGAAGAAGATCGTTTCTTTGAGAAGAATCTTGATCTAATTGACATCAATGCCAGTCCCTTCTTCCACAGTTTTGCCTCAAATGAGTGGCTGATCCAGAGATTAGAAATAGTTAGTGCAGTACTTCTTTCCTCCACAGCACTATGCATGGTTACTCTTCCACCAGGGACTTTCAGCTCTGGATTCATTGGCATGGCTCTCTCATATGGCCTTACACTAAATGCTCAACTAGTATTTTCAATTCAAAGTCAATGCAATCTAGCAAATTACATAATTTCTGTAGAGAGGCTAAATCAGTATATGCATATACCAAGTGAGGCACCAGAAGTAATAGAAGGAAATCGTCCTCCTTCAAATTGGCCAGTTGCTGGTAAAGTAGAACTAAATGACTTGCAGGTACGATACAGGCCTGATGGACCACTTATACTCCATGGAATCACATGCACATTCAAAGAAGGACACAAGATTGGAATAGTTGGAAGGACAGGCAGTGGGAAGTCCACTCTCATCAGTGCATTATTTCGTATTGTGGAGCCAGCAGGTGGAAAAATTGTAGTTGATGGCATAGACATATCTTCTATTGGTCTTCATGATTTGAGGTCACGTCTTGGTGTAATACCTCAGGATCCTACTCTTTTTAATGGGACTGTTAGATATAATTTGGACCCTTTATCTCAATACTCTGATCACGAGATATGGGAGGTAAAACCATCCACATTCTGTTTATTTGTACTCAAATTTACAAATGTAGCCTAA 4080 0.3909 MMEDFWSMVCGESDCPGNGVKPPFCYDIKFLKDPSTCTYQFLVICFDVLLLIMLAFILIQKSLFKPFRDQLQVERYSNLQLVSAITNGFLGLLYVCLGIWVLEEELRKRHTFFPLKLWLPELFQGFRWLLVGLSVSLQLKQLPRSWLWLFSLLTLFVSIIFCILSICHAISSRKLTFKEALDFLSFPGSVLLLLCTYKVYKCEDTDREIDEGLYHPLNGQFSEVDPDNYVTPFAKAGFLSKMSFWWLNPLMKGGQEKTLQDEDIPKLRESDRTESCYLSYLERLNREKGKDPLSQSTVLWTIVWCHRREILVTGFFALLKVLTLSTGPVLLNAFILVSEGNGSFKYEGYVLVVSLFIIKIIESLSQRQWYFRSRLVGMKVRSLLTAAIYKKILRLSSAARLTHSSGEIMNYVTVDAYRIGEFPYWFHQLWTTSLQICIAVVILFHAIGIATISSLVVIVFTVLCNVPLAKLQHEFQSKLMVAQDERLKASSEALTNMKVLKLYAWETHFKNAIERLRSLELKILRSVQLRKAYNIFLFWTSPILVSAASFGTCYFLNIPLHANNLFTFVATIRLVQEPITGIPDVIGVVIQAKVAFFRIVQFLNAPELQSENFRDKSFDGSKGSITIKSADFSWEGNVSKSTLRRINLEIGHGQKLAICGEVGSGKSTLLATILGEVPMIKGTIEVHGKFAYVSQTAWIQTGTIRENILFGSNLDAHRYEGTLRRSSLLKDLELFPHGDLTQIGERGVNLSGGQKQRIQLARALYQNADVYLLDDPFSAVDAHTATSLFNEYIMDGLKEKTVLLVTHQVDFLPAFDSVLLMSNGEILESAPYHHLLSSSQEFQDLVNAHKKTAGSDKPMNASSSKRPLISAKEITQAFKEKQLDATNGNQLIKEEEREIGDTGLKPYFQYLNQKKGYIYFFVTSLCHLLFVICQILQNSWMAANVDSFQVSTLRLIVVYFMIGAVSTVFLLIRTLLLVALGIQSSKYLFLQLMNSLFCAPMSFYDSTPLGRILSRVSSDLSIMDIDIPFIIAYTVGGTTNFYTNLTVLAIITWQILFIAVPMLYIAIRLQRYYFSTAKEVMRMNGTTKSLVANHVAETTAGVMTIRAFEEEDRFFEKNLDLIDINASPFFHSFASNEWLIQRLEIVSAVLLSSTALCMVTLPPGTFSSGFIGMALSYGLTLNAQLVFSIQSQCNLANYIISVERLNQYMHIPSEAPEVIEGNRPPSNWPVAGKVELNDLQVRYRPDGPLILHGITCTFKEGHKIGIVGRTGSGKSTLISALFRIVEPAGGKIVVDGIDISSIGLHDLRSRLGVIPQDPTLFNGTVRYNLDPLSQYSDHEIWEVKPSTFCLFVLKFTNVA* 1360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01297 1359 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 921 1197 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac4g01297 1359 SUPERFAMILY ABC transporter transmembrane region 905 1214 IPR036640 GO:0005524|GO:0016020
Phac4g01297 1359 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 311 591 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac4g01297 1359 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 233 1343 - -
Phac4g01297 1359 ProSitePatterns ABC transporters family signature. 750 764 IPR017871 GO:0005524|GO:0016887
Phac4g01297 1359 FunFam ABC transporter C family member 5 883 1215 - -
Phac4g01297 1359 Pfam ABC transporter 643 777 IPR003439 GO:0005524
Phac4g01297 1359 CDD ABC_6TM_ABCC_D1 312 599 IPR044746 GO:0140359
Phac4g01297 1359 Pfam ABC transporter 1251 1341 IPR003439 GO:0005524
Phac4g01297 1359 Gene3D - 1218 1348 IPR027417 -
Phac4g01297 1359 CDD ABC_6TM_ABCC_D2 916 1209 IPR044726 GO:0140359
Phac4g01297 1359 FunFam ABC transporter C family member 10 608 861 - -
Phac4g01297 1359 Gene3D ABC transporter type 1, transmembrane domain 298 600 IPR036640 GO:0005524|GO:0016020
Phac4g01297 1359 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 627 848 IPR003439 GO:0005524
Phac4g01297 1359 FunFam ATP-dependent bile acid permease, putative 1220 1349 - -
Phac4g01297 1359 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1224 1343 IPR027417 -
Phac4g01297 1359 Gene3D ABC transporter type 1, transmembrane domain 882 1215 IPR036640 GO:0005524|GO:0016020
Phac4g01297 1359 Gene3D - 601 869 IPR027417 -
Phac4g01297 1359 SUPERFAMILY ABC transporter transmembrane region 299 599 IPR036640 GO:0005524|GO:0016020
Phac4g01297 1359 FunFam ABC transporter C family member 10 294 607 - -
Phac4g01297 1359 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 621 848 IPR027417 -
Phac4g01297 1359 CDD ABCC_MRP_domain1 625 825 - -
Phac4g01297 1359 SMART AAA_5 652 825 IPR003593 GO:0016887
Phac4g01297 1359 SMART AAA_5 1260 1346 IPR003593 GO:0016887
Phac4g01297 1359 Pfam ABC transporter transmembrane region 918 1168 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac4g01297 1359 Pfam ABC transporter transmembrane region 311 577 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01297 Phac-Chr4 32344436 32350751 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01297 597 867 Calmodulin-binding Proteins AT2G36910 27.526 2.80e-22 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01297 K05666 - gmx:100787314 2371.66