Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01296 ATGACAGAGTTTGAGCATCAAAGAGAACATACAATGATGAAGGAATTTTGGAGCATGTTTTGTGCAGAAGCTGATTGTCCTGGGACTAGGGGAAAGCAACCCTTTTGTTTTGATTTGAAGATTTTGAAAAATCCTTCTTCGTGCTTCAACCAGTTCTTGATCTTTTTCTTTGATGTGTCAGTGCTGGTCATGCTGGCGTTGGTTATGATCCAGAAGTACTTGTCCAGACCATTTCAGGGTATGTTTCAGGTGGGAAGACATTCAAACTTGCAGAAAATTTCTTCCATAACCAATGCATCTCTGGGGTTGTTGTATTTGTGCTTAGGCATTTGGACTTTAGAGGAGAACTTAAGGAAGAGTCACACTCTTCTTCCCCTTAATGGGTGGTTGTTAGAACTTTTTGAAGGATTCAGATGGTTCTTAGTAGGCTTAAGTGTAAGTCTTAAGTTGAAACAACTTCCAAGATCATGGTTGTGGTTGTTTTCACTTATTACACTATTTGTTTCGAGTATTTTCTGTGTTTTATCTATGTCTTATGCAATTAGTATCAGAGAACTGACCTTCAAGGAAGCTTTAGATGTTCTATCTTTTCCAGGAGCAGTTTTGCTACTCTTGTGCACTTATAAAGCATCTGAACGTGAAGACACTGCTACTAGAATTGATGAAGACTTTTATGACTCTTTAAACTGCCACTTTAATGAAGTTGATCCTTATAACTACGTAACCCCATTTGCTAAAGCTGGATTCCTTAGTAGGATGTCATTTTGGTGGTTGAATCCATTGATGAAAATCGGTCAAGAGAAAACACTTCAGGATGAGGATATGCCAAAGTTACCAGAATCGGATCGAGCAGAATTTTGCTACTTGTCATTTTTAGAACAATTGAACAAGCAAGAAGATAAAGAATCATTGCCACAATCATCAATTTTGTGGGCAATAATTTTGTGCCACAGGAAAGATATTTTGATGTCCGGATTGTTTGCATTGCTCAAGGTACTCACTGTATGTACTGGTCCTGTACTTTTGAATGCTTTTATATCGATTGCTGAGGGTAATGGCAGTTTCAAATATGAGGGTTATGTATTGGTCATATCACTATTCATCATAAAGATCGCAGAGTCCCTTTCACAAAGGCAATGGTATTTTCACACTAGGCTTGTTGGGATGAAAGTTAGGTCACTACTTACAGCTTCCATCTATAAAAAAATATTGAGGTTGTCTAGTGCAGCTAGATTGACTCACTCTGGTGGTGAGATAATGAATTATGTGACTGTGGATGCTTACAGAATTGGAGAATTCCCATTTTGGTTTCACCAGACATGGACAACAAGCCTCCAACTATGTATTGCACTTGTAATACTTTTCCGTGCTATTGGCCTAGCAACAATTGCCTCATTGGTGGTGATAGTTCTCACTGTGCTTTGCAATACTCCTCTAACAAAGATGCAACATCAGTTTCAGACTAAACTCGTGGTGGCACAAGATAAGAGATTGAAGGTTAGTTCTGAGGCTCTTGTGAATATGAAAGTTCTGAAGCTATATGCCTGGGACACCCATTTTAAAAATGCTATTGAAAGATTAAGAAATGTGGAACTGAAATTTTTAGGTGCAGTGCAACTGAGAAAGGCATACAACATCATTTTATTTTGGACCTCACCTGTTTTGGTGTCTGCTGCTTCTTTTGGTGCATGTTACTTTTTGAACGTTCCTTTACATGCAAACAATGTTTTCACTTTTGTGGCAACTTTACGCCTGGTGCAAGAACCAATTACAGCCATACCAGATGTTGTTGGGGTAGTCATTCAAGCAAAAGTCGCATATGCCAGGATTGTTAATTTCCTTGAGGCATCTGAATTACAAAGTGCAAAATTCAGGAATAGGTGTTTTGATGATAGTAATAAAGGCCCAATTTCAATAAAATCTGCTGACTTTTCATGGGAAGGCAATGTATCAAAGTCCACACTGAGGAACATAAACTTGGAGATTAGACATGGGCAGAAGTTGGCAATTTGTGGAGAAGTTGGTTCAGGAAAATCAACCCTCTTAACAACAATTCTCGGTGAAGTTCCTCTGACAAAGGGGACTATAAAAGTTTATGGAAAGTTTGCATATGTTTCTCAAACAGCATGGATACAAACAGGAACAATACGGGAAAATATTTTGTTTGGATCTGATTTGGATGCTCCGAGATATCAAGAAACACTTCGTAGATCATCACTACTAAAGGATTTGGAGCTTTTTCCCCACGGAGATCTCACGCAAATAGGTGAGAGAGGAGTTAACTTGAGTGGAGGTCAAAAGCAGAGAATTCAATTCGCACGTGCACTTTATCAGAATGCTGATGTGTATCTTTTGGATGATCCATTTAGTGCTGTTGATGCACATACTGCCACAAATTTGTTTAATGAATACATCATGAATGGTCTTAAAGAGAAAACTGTTTTGCTCGTTACTCATCAAGTTGACTTTCTACCAGCGTTTGATTCTGTTTTGAGGCATTCAACTTCTGTCAGAGAGATTACACAAGCTTTCATGGAGAAGCAGTTAAAAGCAACAAATGAAAATCAGTTAATAAAGGAAGAAGAGAGAGAGATAGGAAACACAGGGTTGAAACCGTACTTGCAATATTTGAATGGGAAGAAAGGTTATGCATACTTCTTTATGGCTTCTTTTTGTCACCTCATGTTTGTCATTTGCCAGATACTGCAAAACTCATGGATGGCTGCAAATGTTGACAATGCCCAAGTCAGCACATTGCGGTTGATTGTAGTTTACTTCTTTATTGGGGTTGCTTCTATAATTTTCTTGTTGATCAGAACTCTGCTTGTAGTTGCCTTTGGTATTCAATCATCAACATATTTATTTGTACAGTTACTGAACTCCCTTTTTCGTGCACCAATGTCCTTTTATGATTGTACACCATTGGGAAGGATACTTAGCAGGGTCTCATCAGATCTAAGCGTTATGGATCTTGATATACCTTTTATCCTAAGTTTCACTGTGGTAGGAGCTATATACTTATGTTCTAATCTCACAGTCCTAGCAATTGTCTCTTGGCAAGTCGTGGTTGTCTCCTTACCGATGGTTTATGCTGCAATTCACTTGCAGAGATACTATTTTTCCACTGCAAAAGAATTGATGCGCGTGAATGGCACAACAAAATCATTTGTAGCTAATCATATAGCTGAAACAACTGCTGGAGCTGTGACAATAAGAGCTTTTGAGGAAGAAGATCGCTTTTTCAAGAAGAATCTTGATCTAATTGATATCAATGCCAGTCCCTTCTTTCATAGTTTTGCCTCAAATGAGTGGTTGATCCAAAGATTAGAAATAATTAGTGCATTACTTCTTACCTCTGCAGCACTATGCATGGTTATGCTTCCACCAGGAACTTTCAGCTCTGGATTGGTTGGCATGACTCTCTCTTATGGCTTTACCTTAAATGCTTCCTTAGTATTTTTAATTCAAAGTCAATGCAGCCTAGAAAATTACATAGTATCCGTAGAGAGGCTAAATCAATATATGCATATACCAAGTGAGGCACCAAAAGTAATAGAAGGAAATCGTCCTCCTTCAAATTGGCCAGTTTCTGGTAAAGTGGAACTAAATGACTTGCAGGTACGATACAGGCCAAATGGAGCACTTATACTCCATGGAATCACATGCACATTCAAAGCAGGACACAAGATTGGAATCGTTGGAAGGACAGGCAGTGGGAAGTCCACTCTTATTAGTGCTTTATTTCGTCTTGTGGAGCCAGCAGGTGGAAAAATTGTGGTTGATGGCATAGACATATCTTCTATTGACCTTCATGATTTGAGATCACGTTTTGGAGTTATACCTCAGGATCCTACCCTTTTTAATGGAACTGTCAGATATAATTTGGACCCTTTATCTCAATACTCTGATCAACAACTATGGGAGGTTCTTGGGAAGTGTCAGCTGCGTGAAGTTGTACAAGAGAAAGAGGAGGGACTAAACTCCTCAGTTGTTGAAGATGGATCAAACTGGAGCATGGGACAAAGGCAATTATTTTGTTTGGGGCGTGCGCTGTTAAGGAGAAGTAGGATATTGGTGTTGGATGAAGCCACTGCTTCTATTGACAATGCTACTGATTTGATTCTGCAGAAAACCATTAGGACTGAGTTTGCAGATTGTACAGTGATCACAGTAGCACACAGAATACCAACCGTGATGGATTGCAGTATGGTTCTTTCAATTAGTGATGGAAAATTGATGGAGTACGATGAACCAGTTAACTTGATGAACAAAGATGGATCGCTATTCAAGCAGCTTGTCAAGGAATACTGGTCTCATTTTCATTCTGCAGAATCATATTGA 4341 0.3886 MTEFEHQREHTMMKEFWSMFCAEADCPGTRGKQPFCFDLKILKNPSSCFNQFLIFFFDVSVLVMLALVMIQKYLSRPFQGMFQVGRHSNLQKISSITNASLGLLYLCLGIWTLEENLRKSHTLLPLNGWLLELFEGFRWFLVGLSVSLKLKQLPRSWLWLFSLITLFVSSIFCVLSMSYAISIRELTFKEALDVLSFPGAVLLLLCTYKASEREDTATRIDEDFYDSLNCHFNEVDPYNYVTPFAKAGFLSRMSFWWLNPLMKIGQEKTLQDEDMPKLPESDRAEFCYLSFLEQLNKQEDKESLPQSSILWAIILCHRKDILMSGLFALLKVLTVCTGPVLLNAFISIAEGNGSFKYEGYVLVISLFIIKIAESLSQRQWYFHTRLVGMKVRSLLTASIYKKILRLSSAARLTHSGGEIMNYVTVDAYRIGEFPFWFHQTWTTSLQLCIALVILFRAIGLATIASLVVIVLTVLCNTPLTKMQHQFQTKLVVAQDKRLKVSSEALVNMKVLKLYAWDTHFKNAIERLRNVELKFLGAVQLRKAYNIILFWTSPVLVSAASFGACYFLNVPLHANNVFTFVATLRLVQEPITAIPDVVGVVIQAKVAYARIVNFLEASELQSAKFRNRCFDDSNKGPISIKSADFSWEGNVSKSTLRNINLEIRHGQKLAICGEVGSGKSTLLTTILGEVPLTKGTIKVYGKFAYVSQTAWIQTGTIRENILFGSDLDAPRYQETLRRSSLLKDLELFPHGDLTQIGERGVNLSGGQKQRIQFARALYQNADVYLLDDPFSAVDAHTATNLFNEYIMNGLKEKTVLLVTHQVDFLPAFDSVLRHSTSVREITQAFMEKQLKATNENQLIKEEEREIGNTGLKPYLQYLNGKKGYAYFFMASFCHLMFVICQILQNSWMAANVDNAQVSTLRLIVVYFFIGVASIIFLLIRTLLVVAFGIQSSTYLFVQLLNSLFRAPMSFYDCTPLGRILSRVSSDLSVMDLDIPFILSFTVVGAIYLCSNLTVLAIVSWQVVVVSLPMVYAAIHLQRYYFSTAKELMRVNGTTKSFVANHIAETTAGAVTIRAFEEEDRFFKKNLDLIDINASPFFHSFASNEWLIQRLEIISALLLTSAALCMVMLPPGTFSSGLVGMTLSYGFTLNASLVFLIQSQCSLENYIVSVERLNQYMHIPSEAPKVIEGNRPPSNWPVSGKVELNDLQVRYRPNGALILHGITCTFKAGHKIGIVGRTGSGKSTLISALFRLVEPAGGKIVVDGIDISSIDLHDLRSRFGVIPQDPTLFNGTVRYNLDPLSQYSDQQLWEVLGKCQLREVVQEKEEGLNSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCSMVLSISDGKLMEYDEPVNLMNKDGSLFKQLVKEYWSHFHSAESY* 1447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01296 1446 CDD ABC_6TM_ABCC_D1 324 610 IPR044746 GO:0140359
Phac4g01296 1446 SUPERFAMILY ABC transporter transmembrane region 310 610 IPR036640 GO:0005524|GO:0016020
Phac4g01296 1446 ProSitePatterns ABC transporters family signature. 762 776 IPR017871 GO:0005524|GO:0016887
Phac4g01296 1446 FunFam ABC transporter C family member 3 1183 1435 - -
Phac4g01296 1446 CDD ABCC_MRP_domain2 1198 1418 - -
Phac4g01296 1446 CDD ABCC_MRP_domain1 637 831 - -
Phac4g01296 1446 Gene3D ABC transporter type 1, transmembrane domain 292 618 IPR036640 GO:0005524|GO:0016020
Phac4g01296 1446 Gene3D ABC transporter type 1, transmembrane domain 852 1181 IPR036640 GO:0005524|GO:0016020
Phac4g01296 1446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1190 1428 IPR027417 -
Phac4g01296 1446 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1200 1434 IPR003439 GO:0005524
Phac4g01296 1446 Pfam ABC transporter transmembrane region 885 1147 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac4g01296 1446 Pfam ABC transporter transmembrane region 322 587 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac4g01296 1446 Pfam ABC transporter 1217 1365 IPR003439 GO:0005524
Phac4g01296 1446 SUPERFAMILY ABC transporter transmembrane region 873 1180 IPR036640 GO:0005524|GO:0016020
Phac4g01296 1446 Gene3D - 631 851 IPR027417 -
Phac4g01296 1446 FunFam Multidrug resistance-associated protein 4 622 870 - -
Phac4g01296 1446 Gene3D - 1184 1436 IPR027417 -
Phac4g01296 1446 FunFam ABC transporter C family member 10 305 618 - -
Phac4g01296 1446 CDD ABC_6TM_ABCC_D2 886 1175 IPR044726 GO:0140359
Phac4g01296 1446 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 887 1163 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac4g01296 1446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 633 831 IPR027417 -
Phac4g01296 1446 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 639 860 IPR003439 GO:0005524
Phac4g01296 1446 FunFam ABC transporter C family member 5 849 1181 - -
Phac4g01296 1446 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 322 602 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac4g01296 1446 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 244 1434 - -
Phac4g01296 1446 SMART AAA_5 664 837 IPR003593 GO:0016887
Phac4g01296 1446 SMART AAA_5 1226 1409 IPR003593 GO:0016887
Phac4g01296 1446 Pfam ABC transporter 655 789 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01296 Phac-Chr4 32327069 32337657 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01296 631 862 Calmodulin-binding Proteins AT2G36910 32.937 2.81e-22 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01296 K05666 - gmx:100787314 2394.39