Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01294 ATGACAGAGTTTGAGCATCAAAGAGAACATACAATGATGAAGGAATTTTGGAGCATGTTTTGTGCAGAAGCTGATTGTCCTGGGACTAGGGGAAAGCAACCCTTTTGTTTTGATTTGAAGATTTTGAAAAATCCTTCTTCGTGCTTCAACCAGTTCTTGATCTTTTTCTTTGATGTGTCAGTGCTGGTCATGCTGGCGTTGGTTATGATCCAGAAGTACTTGTCCAGACCATTTCAGGGTATGTTTCAGGTGGGAAGACATTCAAACTTGCAGAAAATTTCTTCCATAACCAATGCATCTCTGGGGTTGTTGTATTTGTGCTTAGGCATTTGGACTTTAGAGGAGAACTTAAGGAAGAGTCACACTCTTCTTCCCCTTAATGGGTGGTTGTTAGAACTTTTTGAAGGATTCAGATGGTTCTTAGTAGGCTTAAGTGTAAGTCTTAAGTTGAAACAACTTCCAAGATCATGGTTGTGGTTGTTTTCACTTATTACACTATTTGTTTCGAGTATTTTCTGTGTTTTATCTATGTCTTATGCAATTAGTATCAGAGAACTGACCTTCAAGGAAGCTTTAGATGTTCTATCTTTTCCAGGAGCAGTTTTGCTACTCTTGTGCACTTATAAAGCATCTGAACGTGAAGACACTGCTACTAGAATTGATGAAGACTTTTATGACTCTTTAAACTGCCACTTTAATGAAGTTGATCCTTATAACTACGTAACCCCATTTGCTAAAGCTGGATTCCTTAGTAGGATGTCATTTTGGTGGTTGAATCCATTGATGAAAATCGGTCAAGAGAAAACACTTCAGGATGAGGATATGCCAAAGTTACCAGAATCGGATCGAGCAGAATTTTGCTACTTGTCATTTTTAGAACAATTGAACAAGCAAGAAGATAAAGAATCATTGCCACAATCATCAATTTTGTGGGCAATAATTTTGTGCCACAGGAAAGATATTTTGATGTCCGGATTGTTTGCATTGCTCAAGGTACTCACTGTATGTACTGGTCCTGTACTTTTGAATGCTTTTATATCGATTGCTGAGGGTAATGGCAGTTTCAAATATGAGGGTTATGTATTGGTCATATCACTATTCATCATAAAGATCGCAGAGTCCCTTTCACAAAGGCAATGGTATTTTCACACTAGGCTTGTTGGGATGAAAGTTAGGTCACTACTTACAGCTTCCATCTATAAAAAAATATTGAGGTTGTCTAGTGCAGCTAGATTGACTCACTCTGGTGGTGAGATAATGAATTATGTGACTGTGGATGCTTACAGAATTGGAGAATTCCCATTTTGGTTTCACCAGACATGGACAACAAGCCTCCAACTATGTATTGCACTTGTAATACTTTTCCGTGCTATTGGCCTAGCAACAATTGCCTCATTGGTGGTGATAGTTCTCACTGTGCTTTGCAATACTCCTCTAACAAAGATGCAACATCAGTTTCAGACTAAACTCGTGGTGGCACAAGATAAGAGATTGAAGGTTAGTTCTGAGGCTCTTGTGAATATGAAAGTTCTGAAGCTATATGCCTGGGACACCCATTTTAAAAATGCTATTGAAAGATTAAGAAATGTGGAACTGAAATTTTTAGGTGCAGTGCAACTGAGAAAGGCATACAACATCATTTTATTTTGGACCTCACCTGTTTTGGTGTCTGCTGCTTCTTTTGGTGCATGTTACTTTTTGAACGTTCCTTTACATGCAAACAATGTTTTCACTTTTGTGGCAACTTTACGCCTGGTGCAAGAACCAATTACAGCCATACCAGATGTTGTTGGGGTAGTCATTCAAGCAAAAGTCGCATATGCCAGGATTGTTAATTTCCTTGAGGCATCTGAATTACAAAGTGCAAAATTCAGGAATAGGTGTTTTGATGATAGTAATAAAGGCCCAATTTCAATAAAATCTGCTGACTTTTCATGGGAAGGCAATGTATCAAAGTCCACACTGAGGAACATAAACTTGGAGATTAGACATGGGCAGAAGTTGGCAATTTGTGGAGAAGTTGGTTCAGGAAAATCAACCCTCTTAACAACAATTCTCGGTGAAGTTCCTCTGACAAAGGGGACTATAAAAGTTTATGGAAAGTTTGCATATGTTTCTCAAACAGCATGGATACAAACAGGAACAATACGGGAAAATATTTTGTTTGGATCTGATTTGGATGCTCCGAGATATCAAGAAACACTTCGTAGATCATCACTACTAAAGGATTTGGAGCTTTTTCCCCACGGAGATCTCACGCAAATAGGTGAGAGAGGAGTTAACTTGAGTGGAGGTCAAAAGCAGAGAATTCAATTCGCACGTGCACTTTATCAGAATGCTGATGTGTATCTTTTGGATGATCCATTTAGTGCTGTTGATGCACATACTGCCACAAATTTGTTTAATGAATACATCATGAATGGTCTTAAAGAGAAAACTGTTTTGCTCGTTACTCATCAAGTTGACTTTCTACCAGCGTTTGATTCTGTTTTGTTGATGTCAAATGGGAAAATCCTAGAAGTTGCCCCTTATTATCATTTGTTGACGTCAAGCCGAGAATTCCAATATCTTGTTAATGCTCACAATGAAACTGCAGGTTCTGACAACCCTATGAATGTTTCTTCTTCCCAGAGGCATTCAACTTCTGTCAGAGAGATTACACAAGCTTTCATGGAGAAGCAGTTAAAAGCAACAAATGAAAATCAGTTAATAAAGGAAGAAGAGAGAGAGATAGGAAACACAGGGTTGAAACCGTACTTGCAATATTTGAATGGGAAGAAAGGTTATGCATACTTCTTTATGGCTTCTTTTTGTCACCTCATGTTTGTCATTTGCCAGATACTGCAAAACTCATGGATGGCTGCAAATGTTGACAATGCCCAAGTCAGCACATTGCGGTTGATTGTAGTTTACTTCTTTATTGGGGTTGCTTCTATAATTTTCTTGTTGATCAGAACTCTGCTTGTAGTTGCCTTTGGTATTCAATCATCAACATATTTATTTGTACAGTTACTGAACTCCCTTTTTCGTGCACCAATGTCCTTTTATGATTGTACACCATTGGGAAGGATACTTAGCAGGGTCTCATCAGATCTAAGCGTTATGGATCTTGATATACCTTTTATCCTAAGTTTCACTGTGGTAGGAGCTATATACTTATGTTCTAATCTCACAGTCCTAGCAATTGTCTCTTGGCAAGTCGTGGTTGTCTCCTTACCGATGGTTTATGCTGCAATTCACTTGCAGAGATACTATTTTTCCACTGCAAAAGAATTGATGCGCGTGAATGGCACAACAAAATCATTTGTAGCTAATCATATAGCTGAAACAACTGCTGGAGCTGTGACAATAAGAGCTTTTGAGGAAGAAGATCGCTTTTTCAAGAAGAATCTTGATCTAATTGATATCAATGCCAGTCCCTTCTTTCATAGTTTTGCCTCAAATGAGTGGTTGATCCAAAGATTAGAAATAATTAGTGCATTACTTCTTACCTCTGCAGCACTATGCATGGTTATGCTTCCACCAGGAACTTTCAGCTCTGGATTGGTTGGCATGACTCTCTCTTATGGCTTTACCTTAAATGCTTCCTTAGTATTTTTAATTCAAAGTCAATGCAGCCTAGAAAATTACATAGTATCCGTAGAGAGGCTAAATCAATATATGCATATACCAAGTGAGGCACCAAAAGTAATAGAAGGAAATCGTCCTCCTTCAAATTGGCCAGTTTCTGGTAAAGTGGAACTAAATGACTTGCAGGTACGATACAGGCCAAATGGAGCACTTATACTCCATGGAATCACATGCACATTCAAAGCAGGACACAAGATTGGAATCGTTGGAAGGACAGGCAGTGGGAAGTCCACTCTTATTAGTGCTTTATTTCGTCTTGTGGAGCCAGCAGGTGGAAAAATTGTGGTTGATGGCATAGACATATCTTCTATTGACCTTCATGATTTGAGATCACGTTTTGGAGTTATACCTCAGGATCCTACCCTTTTTAATGGAACTGTCAGATATAATTTGGACCCTTTATCTCAATACTCTGATCAACAACTATGGGAGGTTCTTGGGAAGTGTCAGCTGCGTGAAGTTGTACAAGAGAAAGAGGAGGGACTAAACTCCTCAGTTGTTGAAGATGGATCAAACTGGAGCATGGGACAAAGGCAATTATTTTGTTTGGGGCGTGCGCTGTTAAGGAGAAGTAGGATATTGGTGTTGGATGAAGCCACTGCTTCTATTGACAATGCTACTGATTTGATTCTGCAGAAAACCATTAGGACTGAGTTTGCAGATTGTACAGTGATCACAGTAGCACACAGAATACCAACCGTGATGGATTGCAGTATGGTTCTTTCAATTAGTGATGGAAAATTGATGGAGTACGATGAACCAGTTAACTTGATGAACAAAGATGGATCGCTATTCAAGCAGCTTGTCAAGGAATACTGGTCTCATTTTCATTCTGCAGAATCATATTGA 4479 0.3887 MTEFEHQREHTMMKEFWSMFCAEADCPGTRGKQPFCFDLKILKNPSSCFNQFLIFFFDVSVLVMLALVMIQKYLSRPFQGMFQVGRHSNLQKISSITNASLGLLYLCLGIWTLEENLRKSHTLLPLNGWLLELFEGFRWFLVGLSVSLKLKQLPRSWLWLFSLITLFVSSIFCVLSMSYAISIRELTFKEALDVLSFPGAVLLLLCTYKASEREDTATRIDEDFYDSLNCHFNEVDPYNYVTPFAKAGFLSRMSFWWLNPLMKIGQEKTLQDEDMPKLPESDRAEFCYLSFLEQLNKQEDKESLPQSSILWAIILCHRKDILMSGLFALLKVLTVCTGPVLLNAFISIAEGNGSFKYEGYVLVISLFIIKIAESLSQRQWYFHTRLVGMKVRSLLTASIYKKILRLSSAARLTHSGGEIMNYVTVDAYRIGEFPFWFHQTWTTSLQLCIALVILFRAIGLATIASLVVIVLTVLCNTPLTKMQHQFQTKLVVAQDKRLKVSSEALVNMKVLKLYAWDTHFKNAIERLRNVELKFLGAVQLRKAYNIILFWTSPVLVSAASFGACYFLNVPLHANNVFTFVATLRLVQEPITAIPDVVGVVIQAKVAYARIVNFLEASELQSAKFRNRCFDDSNKGPISIKSADFSWEGNVSKSTLRNINLEIRHGQKLAICGEVGSGKSTLLTTILGEVPLTKGTIKVYGKFAYVSQTAWIQTGTIRENILFGSDLDAPRYQETLRRSSLLKDLELFPHGDLTQIGERGVNLSGGQKQRIQFARALYQNADVYLLDDPFSAVDAHTATNLFNEYIMNGLKEKTVLLVTHQVDFLPAFDSVLLMSNGKILEVAPYYHLLTSSREFQYLVNAHNETAGSDNPMNVSSSQRHSTSVREITQAFMEKQLKATNENQLIKEEEREIGNTGLKPYLQYLNGKKGYAYFFMASFCHLMFVICQILQNSWMAANVDNAQVSTLRLIVVYFFIGVASIIFLLIRTLLVVAFGIQSSTYLFVQLLNSLFRAPMSFYDCTPLGRILSRVSSDLSVMDLDIPFILSFTVVGAIYLCSNLTVLAIVSWQVVVVSLPMVYAAIHLQRYYFSTAKELMRVNGTTKSFVANHIAETTAGAVTIRAFEEEDRFFKKNLDLIDINASPFFHSFASNEWLIQRLEIISALLLTSAALCMVMLPPGTFSSGLVGMTLSYGFTLNASLVFLIQSQCSLENYIVSVERLNQYMHIPSEAPKVIEGNRPPSNWPVSGKVELNDLQVRYRPNGALILHGITCTFKAGHKIGIVGRTGSGKSTLISALFRLVEPAGGKIVVDGIDISSIDLHDLRSRFGVIPQDPTLFNGTVRYNLDPLSQYSDQQLWEVLGKCQLREVVQEKEEGLNSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCSMVLSISDGKLMEYDEPVNLMNKDGSLFKQLVKEYWSHFHSAESY* 1493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01294 1492 CDD ABC_6TM_ABCC_D1 324 610 IPR044746 GO:0140359
Phac4g01294 1492 SMART AAA_5 664 837 IPR003593 GO:0016887
Phac4g01294 1492 SMART AAA_5 1272 1455 IPR003593 GO:0016887
Phac4g01294 1492 ProSitePatterns ABC transporters family signature. 762 776 IPR017871 GO:0005524|GO:0016887
Phac4g01294 1492 SUPERFAMILY ABC transporter transmembrane region 919 1226 IPR036640 GO:0005524|GO:0016020
Phac4g01294 1492 FunFam ABC transporter C family member 5 895 1227 - -
Phac4g01294 1492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 633 859 IPR027417 -
Phac4g01294 1492 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 639 860 IPR003439 GO:0005524
Phac4g01294 1492 FunFam ABC transporter C family member 5 626 867 - -
Phac4g01294 1492 Pfam ABC transporter transmembrane region 931 1193 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac4g01294 1492 Pfam ABC transporter transmembrane region 322 587 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac4g01294 1492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1236 1474 IPR027417 -
Phac4g01294 1492 Pfam ABC transporter 1263 1411 IPR003439 GO:0005524
Phac4g01294 1492 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 933 1209 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac4g01294 1492 CDD ABCC_MRP_domain1 637 837 - -
Phac4g01294 1492 CDD ABCC_MRP_domain2 1244 1464 - -
Phac4g01294 1492 FunFam ABC transporter C family member 10 305 618 - -
Phac4g01294 1492 Gene3D - 1230 1482 IPR027417 -
Phac4g01294 1492 SUPERFAMILY ABC transporter transmembrane region 310 610 IPR036640 GO:0005524|GO:0016020
Phac4g01294 1492 Gene3D - 631 866 IPR027417 -
Phac4g01294 1492 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1246 1480 IPR003439 GO:0005524
Phac4g01294 1492 Pfam ABC transporter 655 789 IPR003439 GO:0005524
Phac4g01294 1492 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 322 602 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac4g01294 1492 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 244 1480 - -
Phac4g01294 1492 CDD ABC_6TM_ABCC_D2 932 1221 IPR044726 GO:0140359
Phac4g01294 1492 Gene3D ABC transporter type 1, transmembrane domain 292 618 IPR036640 GO:0005524|GO:0016020
Phac4g01294 1492 Gene3D ABC transporter type 1, transmembrane domain 893 1227 IPR036640 GO:0005524|GO:0016020
Phac4g01294 1492 FunFam ABC transporter C family member 3 1229 1481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01294 Phac-Chr4 32327069 32337657 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01294 631 893 Calmodulin-binding Proteins AT2G36910 30.142 2.05e-25 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01294 K05666 - gmx:100787314 2487.99