Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01282 ATGGAGGCCAGGGTCTCTTCCTCTCTGGGCCTCCCTTCTCCGAAGCCCCATGAAATCTCAATCTCCACAACCCTCTCCGACTTCCCCTCCCTCCTCACCCACTTCCCCCCCTTCGCCTCCACCACCTCCGTCAAATGGCCCCGGCCCAGCCCAAAACCCCAGTCTCTCAAAACCCTCCCTCTCCTTGACCGGGCCCTAATCGGCGCCGCCGCAGGCGGACTTGCCGGCGCCTTCACCTACGTTTGCCTCCTCCCCCTCGACACCATCAAAACCAAGATGCAGACCAAAGGCGCTGCGCAAATTTACAAAAACACCCTCGACGCAGTCGTGAAAACATTCCAGTCCAGCGGCCTCCTCGGCTTCTACAGCGGCGTCTCCGCCGTCATAGTCGGTTCAACCGCCTCATCCGCCGTCTACTTCGGCACCTGCGAGTTTGGCAAATCGTTCCTTGGAAAACTCGAAAATTTCCCCGCCGTCCTGATCCCTCCAACCGCCGGCGCCATGGGGAATGTCGCCTCGTCGGCGATCATGGTACCCAAGGAGCTCATCACGCAGCGAATGCAAGCCGGCGCGAAGGGACGCTCCTGGCAAGTCCTCGTCGAAATTCTCCAAAACGACGGCGTTATGGGCCTCTACGCTGGGTATTCGGCAACGTTGCTCCGAAACCTACCCGCAGGGGTTCTGAGTTATTCCTCCTTCGAGTATCTAAAAGCCGCGGTGCTGCAGAAAACGGAGAAGAACTACTTGGAACCGGTTCAGAGCGTTCTGTGTGGGGCTCTTGCGGGGGCCATTTCGGCGTCGCTTACGACACCGTTGGACGTGGTGAAGACGCGGTTGATGACGCAGGTGCGCGGCGAGGGGGTGGGTAAGGTTTCGGCGGTTATGTACGACGGCGTTTCGGCCACGGTGAAGCAAATTTTGAAGGAAGAAGGGTGGGTGGGGCTGACACGTGGCATGGGGCCAAGGGTGCTTCACAGCGCGTGCTTTTCCGCGTTGGGGTACTTCGCTTTTGAGACGGCGAGGCTTGGGATTTTGCAGGAGTATCTTAGGAGGAAGGAGTTGAGTGAAAGACAAACTCAAGTTTCTGTTTCCACTGCCTGA 1101 0.5858 MEARVSSSLGLPSPKPHEISISTTLSDFPSLLTHFPPFASTTSVKWPRPSPKPQSLKTLPLLDRALIGAAAGGLAGAFTYVCLLPLDTIKTKMQTKGAAQIYKNTLDAVVKTFQSSGLLGFYSGVSAVIVGSTASSAVYFGTCEFGKSFLGKLENFPAVLIPPTAGAMGNVASSAIMVPKELITQRMQAGAKGRSWQVLVEILQNDGVMGLYAGYSATLLRNLPAGVLSYSSFEYLKAAVLQKTEKNYLEPVQSVLCGALAGAISASLTTPLDVVKTRLMTQVRGEGVGKVSAVMYDGVSATVKQILKEEGWVGLTRGMGPRVLHSACFSALGYFAFETARLGILQEYLRRKELSERQTQVSVSTA* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01282 366 FunFam Protein MITOFERRINLIKE 1, chloroplastic 38 194 - -
Phac4g01282 366 FunFam protein MITOFERRINLIKE 1, chloroplastic 195 365 - -
Phac4g01282 366 SUPERFAMILY Mitochondrial carrier 66 338 IPR023395 -
Phac4g01282 366 Pfam Mitochondrial carrier protein 164 242 IPR018108 -
Phac4g01282 366 Pfam Mitochondrial carrier protein 250 341 IPR018108 -
Phac4g01282 366 Pfam Mitochondrial carrier protein 69 152 IPR018108 -
Phac4g01282 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 343 IPR018108 -
Phac4g01282 366 Gene3D Mitochondrial carrier domain 194 365 IPR023395 -
Phac4g01282 366 Gene3D Mitochondrial carrier domain 20 193 IPR023395 -
Phac4g01282 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 157 239 IPR018108 -
Phac4g01282 366 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 62 358 - -
Phac4g01282 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 63 149 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01282 Phac-Chr4 31985169 31987783 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01282 157 346 Chloroplast and Mitochondria Gene Families AT2G30160 24.762 3.13e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01282 K15111 - gmx:100805903 593.964