Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01260 ATGAACCCGAAGTTCATCGGAAAACCGCCGGCGACGATGGACCTCGACCGCATGCCGGAGCGTGGGTCCCACCACCGCCGCTCCCACTCCGACACGTCGTTCCGCTTCGCTGCGAACTTCGACGACCTGCTCCTCTTCGACGCCTCCGACCTCGACATCTCCACGCTCCCCTCGCCGCTTCCTCTGCCTTCACCGGGGGCCTCCGGCTCGGTGCCGATACCGGTAGACTCCGACGAGTCCGGCGGAAGGCCGAGGCCGGCGGGGGCACCCACCGGGGGGCACCTGAGGAGTCTGTCGGTGGGCTCCGATTTCTTTGACGGGTTTGGGTTCGGCGGCAGCGAGGAGAGGAGCGGCGGAGGAAAGGACGGCGGCGAGCGGAGGGTGGGGCACCACCGGCACAGCAACTCCATGGACGGGTCCTCGACGACGTCGTTTGAGGCGGACTCGGCGATGATGATAGATGGCGTGAAGAAAGCTATGGCTCCTGATAAACTCGCTGAACTCGCTCTTATTGATCCCAAGAGAGCTAAGAGGATTCTTGCTAACAGGCAATCTGCTGCTAGATCAAAGGAGAGGAAGATTCGTTACACCAGTGAATTGGAGAGGAAGGTGCAGACACTTCAGACTGAAGCAACCAACCTTTCTGCACAGCTTACCATGCTTCAGAGAGACACCACAGATTTGACTTCAGAGAATAAGGAACTCAAACTGCGTCTAGAGGCTTTGGAGCAAGAAGCACAGCTTAGAGAAGATCTGAATGAGGCATTGAAGGAAGAACTGCAGCGCCTTAGGGCACAGAGTACTCGATTGGGTGCTATGGCAGCAGGTAACCCTTCTTTTGGTGGGATATTCAACCAGTTGGCTTCCCAGTTAGCGATGCAACAGTTGACTAGTTCTGCACCCCAGCAACCACAACACCAGCCACAGGTTGGCATGCCTCCTCCTCCCTCTGGACAGAACCACCCTAACTTCATGGACTTCAATCAGCAGAAGTAG 996 0.5743 MNPKFIGKPPATMDLDRMPERGSHHRRSHSDTSFRFAANFDDLLLFDASDLDISTLPSPLPLPSPGASGSVPIPVDSDESGGRPRPAGAPTGGHLRSLSVGSDFFDGFGFGGSEERSGGGKDGGERRVGHHRHSNSMDGSSTTSFEADSAMMIDGVKKAMAPDKLAELALIDPKRAKRILANRQSAARSKERKIRYTSELERKVQTLQTEATNLSAQLTMLQRDTTDLTSENKELKLRLEALEQEAQLREDLNEALKEELQRLRAQSTRLGAMAAGNPSFGGIFNQLASQLAMQQLTSSAPQQPQHQPQVGMPPPPSGQNHPNFMDFNQQK* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01260 331 Coils Coil 197 273 - -
Phac4g01260 331 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 12 309 - -
Phac4g01260 331 SUPERFAMILY Leucine zipper domain 174 229 IPR046347 GO:0003700|GO:0006355
Phac4g01260 331 MobiDBLite consensus disorder prediction 118 134 - -
Phac4g01260 331 MobiDBLite consensus disorder prediction 1 32 - -
Phac4g01260 331 FunFam Transcription factor VIP1 173 226 - -
Phac4g01260 331 Gene3D - 173 226 - -
Phac4g01260 331 MobiDBLite consensus disorder prediction 294 331 - -
Phac4g01260 331 Pfam bZIP transcription factor 174 233 IPR004827 GO:0003700|GO:0006355
Phac4g01260 331 MobiDBLite consensus disorder prediction 14 32 - -
Phac4g01260 331 CDD bZIP_plant_RF2 175 224 IPR044759 GO:0003700|GO:0006355
Phac4g01260 331 MobiDBLite consensus disorder prediction 54 96 - -
Phac4g01260 331 SMART brlzneu 170 234 IPR004827 GO:0003700|GO:0006355
Phac4g01260 331 MobiDBLite consensus disorder prediction 109 143 - -
Phac4g01260 331 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 172 235 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01260 Phac-Chr4 31035709 31040161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01260 14 330 bZIP Transcription Factor Family AT1G43700 48.266 1.35e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac4g01260 bZIP_1 2.1e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01260 K20557 - gmx:778142 455.677