Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01258 ATGGATGCACAAGCCAAGAAAAAGGCTTTGTTTCGTGCTAAATTGAATGCCCAGAAGAAGGAGAAGCGTATAGAATCTCCCCTTGTGAGGTATAATGAATTTGATCAACCTGTTTGCCGGGTTTGTGAAGTTTTTCTGAAGTCTGAGTCTTTATGGGATGCACACCAAGTTTCTCGTAAGCATCGTGAGGCAATAAGTAACCTGAAAGCTAGTGCTGCTGGATTAACTCAACAAAATAATGCGAAGCCTGTTTCTGATACCAACATTCCCAAGGCTAAACCAGACCATCCTTTGGGCTCACAATCAAAACTTCCAGAAGGTTTGAGAGAAGTGTCTAAGCCTCAATCATCATCAGTGCTTCCGCCTGGTTTTTTTGATGACAATGATTCAGGAAAGACAAGATCTGAACATTTAGCAGCCTCTGATTTAGGTAGAAAACCTGGGGTTTCTGCCAAAAATCAGACGTTAAACTTGGAGAAGGAGAAAGGTCATTTTCATGACAATAAAGCTGCAGAGTCAAATGTTAGCGAAGCCTCAACGGAGAGTAAGCAGACATCAGTCAAGACTACTGATACAGAGACACAAGTAAAAGGGAGTCTGCCTGAAGGATTTTTTGACAATAAGGAAGCTGATTTGCGTGCCCGTGGCATAAAGCTTGTTAAGCCAGATGTTAAAGACGAATACAAGGAATTTGAGAAGTTGATTCAAGAAGATTTGCAGGAGGTTGACAACCGGTTGGAGGAAGAAGAGATTGATGCGGCCGAAATGATAGAGGAAGCTGAATCTGTAGAGCAGAAGATCTTAAGGGAGAAGGTAGAAATGTTAAAGAAGAGGAGATTGGATCTAAAAGCTGCTACTGCTGCAAAGCGTTATAAATCATCTGAGGTTGTAGCCAAGGAATCTACACACGAAGAGTCATCCAGTGATGAGGAAAGTGAAGAAAATTTTGCCGTGGATTGGAGAGCACAACACTTGTAA 978 0.4192 MDAQAKKKALFRAKLNAQKKEKRIESPLVRYNEFDQPVCRVCEVFLKSESLWDAHQVSRKHREAISNLKASAAGLTQQNNAKPVSDTNIPKAKPDHPLGSQSKLPEGLREVSKPQSSSVLPPGFFDDNDSGKTRSEHLAASDLGRKPGVSAKNQTLNLEKEKGHFHDNKAAESNVSEASTESKQTSVKTTDTETQVKGSLPEGFFDNKEADLRARGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMIEEAESVEQKILREKVEMLKKRRLDLKAATAAKRYKSSEVVAKESTHEESSSDEESEENFAVDWRAQHL* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01258 325 Coils Coil 232 273 - -
Phac4g01258 325 MobiDBLite consensus disorder prediction 172 197 - -
Phac4g01258 325 SUPERFAMILY beta-beta-alpha zinc fingers 31 71 IPR036236 -
Phac4g01258 325 MobiDBLite consensus disorder prediction 72 202 - -
Phac4g01258 325 MobiDBLite consensus disorder prediction 292 306 - -
Phac4g01258 325 MobiDBLite consensus disorder prediction 157 171 - -
Phac4g01258 325 PANTHER UNCHARACTERIZED 1 325 IPR040050 GO:0003676|GO:0005681|GO:0008270
Phac4g01258 325 Pfam Zinc-finger of C2H2 type 39 61 - -
Phac4g01258 325 MobiDBLite consensus disorder prediction 292 325 - -
Phac4g01258 325 Gene3D Classic Zinc Finger 32 70 - -
Phac4g01258 325 MobiDBLite consensus disorder prediction 72 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01258 Phac-Chr4 31005400 31016954 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01258 1 325 C2H2 Transcription Factor Family AT3G02860 54.925 2.24e-99 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01258 K13104 - gmx:100808515 514.612