Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01240 ATGTTTGCAGAGGATGTGTTCATAAATGATCTGTCAACGCCACCGCTACTTTCAGAGGAAAGCACTTTTGTTATCTTAGCTGCAATAAAACATATTGTAGCTGATGACGATTGGTGGTACACAGCTTGCTTATGCGGTAAAGCTGTTTACCCGAATTCCAAAATGTTTTTTTGTGAGAAATGTAACAAACATGTTATCAAAGTCCAACAGAGGTATAAGCTGAAGTTGCGAGTGATTGATGAAACGGATTCCACTACTTTCGTTCTATTTGACAGGGATGCCACTACAGTGATCAATAAATCTTGCGCCGAATTATTTGAAAGTCATGATAAGGTAAATTTTCGAACCATGCATATGTTTATTTATGCATATAAGAAAAGAACGGAGATTCTGGTGTACTACCAAAAGAATTTGATCTTTTGA 423 0.3664 MFAEDVFINDLSTPPLLSEESTFVILAAIKHIVADDDWWYTACLCGKAVYPNSKMFFCEKCNKHVIKVQQRYKLKLRVIDETDSTTFVLFDRDATTVINKSCAELFESHDKVNFRTMHMFIYAYKKRTEILVYYQKNLIF* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01240 140 Pfam Replication factor-A C terminal domain 25 113 IPR013955 -
Phac4g01240 140 Gene3D - 4 132 IPR012340 -
Phac4g01240 140 CDD RPA1_DBD_C 23 110 IPR047192 -
Phac4g01240 140 SUPERFAMILY Nucleic acid-binding proteins 18 124 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01240 Phac-Chr4 30689816 30693889 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01240 1 105 Core DNA Replication Machinery Family AT5G08020 30.275 6.35e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01240 - - pvu:PHAVU_007G143500g 180.259