Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01237 ATGCTGGGGGACTCGGCAGTGTTGGGAACAGGAGGAGGAGGGTCTGGAGATGCAGTGGTGGCAGTAGGTGGGGGTGCTGCATCAGGAGGAGCTCATGACGGTGCTGTTGACGTGGCAGGCGGTGGTGGCGGCGGAGGATCAAATTCAGGGGATGATGAGAGGGGGAGAGTGGAGGAAGGTGACAGGAGCTTTGGTGGGAACAGGTGGCCGAGGCAAGAGACTCTGGCTTTGTTGAAGATAAGGTCGGATATGGACGTGGCTTTTAGAGATGCAAGTGTGAAGGGTCCCTTGTGGGAAGAGGTTTCAAGGAAGCTGGCAGATCTTGGCTACCACAGAAATGCCAAGAAGTGCAAAGAGAAGTTCGAGAACGTTTACAAGTACCATAAGAGAACCAAAGAAGGGCGAAGTGGGAAGACAGAAGGCAAAACTTATCGCTTCTTCGATCAATTACAAGCCCTTGAAAACAACCCTGCAATCCATGCTATCCAATCCCCAACACCACCTTCAAAGCCACCACCAGTAACGACAACAGCACTGCCAGCAACACCAGTGTCAATAGTAGTAACAACAACACCCTCTTCAATAATGTCTCTTCCCCCAACCACACCAGTGCCATTGCCACCAGTGTCTAATAACACCACTGTTCCATCAACAACTACACTCCCTATCCCTCAAGGCATTCTCGCCCTCACAACCTCTTCCTACCCATCATCAAACCCTACAACATACTTCCCAACTCAAACACCAAACCCTACTAGCAACAACACCAACAACAAGAACCCTCAAAACACCATCACTCCACCTTCCTTCCCCAACATTCCAACTGATCTCTTGTCCAATTCCAGTTCTTCCTCCACCTCTTCCGAGGAAACAACAACGGAGGGAGGGGGAGCAAGACGCAAGAGGAAGAGGAAGTGGAAGGACTTCTTTGAGAGACTCATGAAGGAAGTCATAGAGAAGCAGGAGGAGCTGCAAAGGAGGTTCCTGGAGGCCATAGAGAAGAGAGAACAAGAGCGTGTGACCAGAGAAGAATCGTGGAGAATGCAAGAGATGCAAAGGATCAACAGGGAAAGGGAGATTCTGGCACAAGAGAGGTCCATTGCTGCGGCAAAAGACGCCGCTGTTATGGCATTTTTGCAGAAGATGGCCGAACATCAGCAAGAAGAAAATAATCTTCAGCCAGCATTGAATACCAACAACAACAACAGCATCACTATTGCTCCACAGCAACCGGTGCCACAAGCAACTCCAACACCAACACCACAACAAAAACAAACAACAACTGTTCCAGAGACCCCACCAGTGCAGTCCTTGGCCCCACAACCACAACAACAGCAACATCAGGTGCAGCAACAGCAACAACTAGTGGTGACTAATGTGGAAATCAATAAAGCTGATAATAACGGTGAGAATTTGATGATGGGAGCGAGTTCTTCGCGGTGGCCAAAAATGGAGGTACAAGCACTGATAGATCTGAGAACAAACCTGGAAACAAAGTACCAGGAAAATGGACCAAAAGGGCCACTGTGGGAGGAGATCTCATCGTTGATGAGGAAAATGGGGTACAACCGGAATGCCAAAAGGTGCAAAGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAGGTCAAGGAAAGCAACAAGAAGAGGCCTGAAGATTCCAAGACCTGTCCCTATTTTCACCAATTAGAGGCTCTATACAAGGAGAAGAACAAGGTGGAGGGCCAAATGAAGCCGGAGAGCATGATGGCGCCCCTCATGGTGCAGCCGGAGCAGCAATGGCCTCCTCAGCAAGTGGTGCCCCCAGAAGTAACCATGGAAGACGCCCAGAATGATCCCATGGACGCGCGGAACCACGAGGATGCTGAGGAAGAGGACGAGGACAAGGAAATAGCAGATGAAGATGATGATGAAGATGATGAAGGTGGTAGTTATGAGATAGTTGCAAGCAAGCCAGCTTCAGCTGGTGATGGTTCTGCTGAGTGA 1986 0.496 MLGDSAVLGTGGGGSGDAVVAVGGGAASGGAHDGAVDVAGGGGGGGSNSGDDERGRVEEGDRSFGGNRWPRQETLALLKIRSDMDVAFRDASVKGPLWEEVSRKLADLGYHRNAKKCKEKFENVYKYHKRTKEGRSGKTEGKTYRFFDQLQALENNPAIHAIQSPTPPSKPPPVTTTALPATPVSIVVTTTPSSIMSLPPTTPVPLPPVSNNTTVPSTTTLPIPQGILALTTSSYPSSNPTTYFPTQTPNPTSNNTNNKNPQNTITPPSFPNIPTDLLSNSSSSSTSSEETTTEGGGARRKRKRKWKDFFERLMKEVIEKQEELQRRFLEAIEKREQERVTREESWRMQEMQRINREREILAQERSIAAAKDAAVMAFLQKMAEHQQEENNLQPALNTNNNNSITIAPQQPVPQATPTPTPQQKQTTTVPETPPVQSLAPQPQQQQHQVQQQQQLVVTNVEINKADNNGENLMMGASSSRWPKMEVQALIDLRTNLETKYQENGPKGPLWEEISSLMRKMGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLEALYKEKNKVEGQMKPESMMAPLMVQPEQQWPPQQVVPPEVTMEDAQNDPMDARNHEDAEEEDEDKEIADEDDDEDDEGGSYEIVASKPASAGDGSAE* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01237 661 SMART sant 477 539 IPR001005 -
Phac4g01237 661 SMART sant 65 127 IPR001005 -
Phac4g01237 661 MobiDBLite consensus disorder prediction 51 66 - -
Phac4g01237 661 MobiDBLite consensus disorder prediction 419 450 - -
Phac4g01237 661 FunFam Trihelix transcription factor GT-2 481 542 - -
Phac4g01237 661 ProSiteProfiles Myb-like domain profile. 479 537 IPR001005 -
Phac4g01237 661 PANTHER FI21293P1 43 621 - -
Phac4g01237 661 MobiDBLite consensus disorder prediction 591 661 - -
Phac4g01237 661 Pfam Myb/SANT-like DNA-binding domain 479 566 IPR044822 -
Phac4g01237 661 Pfam Myb/SANT-like DNA-binding domain 67 153 IPR044822 -
Phac4g01237 661 MobiDBLite consensus disorder prediction 231 293 - -
Phac4g01237 661 CDD GT1 479 544 - -
Phac4g01237 661 FunFam Trihelix transcription factor GT-2 69 130 - -
Phac4g01237 661 MobiDBLite consensus disorder prediction 619 643 - -
Phac4g01237 661 MobiDBLite consensus disorder prediction 231 303 - -
Phac4g01237 661 MobiDBLite consensus disorder prediction 1 68 - -
Phac4g01237 661 Gene3D - 481 542 - -
Phac4g01237 661 Gene3D - 69 130 - -
Phac4g01237 661 MobiDBLite consensus disorder prediction 385 411 - -
Phac4g01237 661 ProSiteProfiles Myb-like domain profile. 67 125 IPR001005 -
Phac4g01237 661 MobiDBLite consensus disorder prediction 385 450 - -
Phac4g01237 661 Coils Coil 307 338 - -
Phac4g01237 661 CDD GT1 67 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01237 Phac-Chr4 30442172 30446953 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01237 65 593 Trihelix Transcription Factor Family AT1G76890 47.455 9.44e-144 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phac4g01237 Myb_DNA-bind_4 9.3e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01237 - - gmx:100804788 763.066