Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01236 ATGCAGCTAGGAGACTCAAGTGTGTTGGAGATCTCCTCCCATAACGAGCCCGAGATGGCGGTGGCGGCGGAAGGAGCGGCACATGGCGGCGAGGTTGACGGTGGTGATGAGATGATTGGGATGGATGTGGATGCAATTTCTGGTGAAGGAAATGAAGGTAATAAGATGAGCTTTGGAGGGAACCGGTGGCCCCGCCAAGAAACTTTGGCTCTCTTGAAGATAAGGTCGGATATGGATGCAGTGTTTCGTGATTCAACTCTTAAAGGTCCACTATGGGAAGAAGTTTCAAGGAAACTTGCAGGGCTTGGATATGATCGAAGTGCAAAGAAGTGCAAGGAAAAGTTTGAGAACGTGTACAAGTACAACAAGAGAACCAAAGAGAGCAAAAGTGGGAAATCACATGGAAAAACCTATAAATTCTTTGATCAATTACAAGCCCTTGAGAATCAGTTCACGATCTCTTACCCGCCAAAACCACAACCTACTTTAGCAACAACAAACACATTGACGTTGCCAGCTAGACAAAGTGATCATGGTAACAACAATGTTATCTCTTATGTCACACCTTTTCCTTCCACAAACCCTACACTCATTTCTCCTTCACCACAAACCAACACCAACACCCCCACAATATCCACAAGAGATACATCACCACCACCGCAAACCACCACTACCAACAACGACAGTGTCACATATTCTTTGCCAAACATGAACACTCCTTTCTCAACCACCACCACCACCTCCACCTCTTCTTCCACAGCATCTGATGAAGACTTGGAAGAGAGGTACAGGAGGAAGAGAAAGTGGAAGGACTACTTCAGGAGGCTCACTAGGAAGGTCCTTTTGAAGCAGGAGGAAATGCAAAAGAAGTTCTTGGAAGCCATGGACAAAAGGGAGAGGGAAAGAGTGACACAACAAGACAATTGGAGGATGCAAGAAATGGCAAGGATTAATAGGGAACATGAGATTCTTGTTCAGGAAAGATCAACAGCAGCAGCCAAAGATGCTGCAGTCATTGCATTATTGCAAAAGATGTATGGCCAGCAAAACACCACACAACATGTACAAGTACAGCCACCAGAACAACAGAAGCAAACAATGCTACAATCAGAGCCTCCAACACTAATGCCAAACAATAATAATTTTGAGATCAAGAAAATGAATAATGGTCACAGTGCTACCGGTATCAGCACTACTACTGTCACTACTTCTCCCGCGAGTTCTTCTAGATGGCCAAAGCCTGAAGTTCATGCTTTGATAAGGTTGAGGACAAGTCTTGACACCAAGTATCAAGAAAATGGACCAAAAGCTCCATTGTGGGAAGATATATCAATTGCAATGCAGAGGCTTGGGTACAACCGGAGTGCAAAGAGATGCAAGGAAAAGTGGGAGAACATCAACAAGTACTTCAAAAAAGTGAGGGAGAATAACAAAGAAAGGCGTGAAAATAGCAAAACATGTCCTTATTTTCACGAGCTTGATGCTATATACAAGGAAAAGAGCTTATCCCAGAACCCCTTTGGCGTGTTCCAGAACATGAAGCCAAATGAGATGATGATGATGGAGCCATTGATGGTGCAACCGGAGCAACAATGGAGGCCTCCACCTCAATCGTTGGAAGAGGGTACAGAGAAGAACGGTGGTGAAGAATATCAAGAAAAAGAAGAAAATGGTGATGGTGGTAATGATGATGATGATGATGTTGAAGAAGATGAAGATGGTGTGGAAGATGAAGCGTGTGAGACTGGGACAAATAATTAA 1761 0.4407 MQLGDSSVLEISSHNEPEMAVAAEGAAHGGEVDGGDEMIGMDVDAISGEGNEGNKMSFGGNRWPRQETLALLKIRSDMDAVFRDSTLKGPLWEEVSRKLAGLGYDRSAKKCKEKFENVYKYNKRTKESKSGKSHGKTYKFFDQLQALENQFTISYPPKPQPTLATTNTLTLPARQSDHGNNNVISYVTPFPSTNPTLISPSPQTNTNTPTISTRDTSPPPQTTTTNNDSVTYSLPNMNTPFSTTTTTSTSSSTASDEDLEERYRRKRKWKDYFRRLTRKVLLKQEEMQKKFLEAMDKRERERVTQQDNWRMQEMARINREHEILVQERSTAAAKDAAVIALLQKMYGQQNTTQHVQVQPPEQQKQTMLQSEPPTLMPNNNNFEIKKMNNGHSATGISTTTVTTSPASSSRWPKPEVHALIRLRTSLDTKYQENGPKAPLWEDISIAMQRLGYNRSAKRCKEKWENINKYFKKVRENNKERRENSKTCPYFHELDAIYKEKSLSQNPFGVFQNMKPNEMMMMEPLMVQPEQQWRPPPQSLEEGTEKNGGEEYQEKEENGDGGNDDDDDVEEDEDGVEDEACETGTNN* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01236 586 Pfam Myb/SANT-like DNA-binding domain 61 147 IPR044822 -
Phac4g01236 586 Pfam Myb/SANT-like DNA-binding domain 409 496 IPR044822 -
Phac4g01236 586 Gene3D - 411 472 - -
Phac4g01236 586 Gene3D - 63 124 - -
Phac4g01236 586 MobiDBLite consensus disorder prediction 528 586 - -
Phac4g01236 586 ProSiteProfiles Myb-like domain profile. 403 467 IPR001005 -
Phac4g01236 586 FunFam Trihelix transcription factor GT-2 63 124 - -
Phac4g01236 586 CDD GT1 61 126 - -
Phac4g01236 586 SMART sant 407 469 IPR001005 -
Phac4g01236 586 SMART sant 59 121 IPR001005 -
Phac4g01236 586 MobiDBLite consensus disorder prediction 191 258 - -
Phac4g01236 586 CDD GT1 410 474 - -
Phac4g01236 586 MobiDBLite consensus disorder prediction 390 410 - -
Phac4g01236 586 FunFam Trihelix transcription factor GT-2 411 472 - -
Phac4g01236 586 MobiDBLite consensus disorder prediction 390 412 - -
Phac4g01236 586 PANTHER FI21293P1 38 552 - -
Phac4g01236 586 ProSiteProfiles Myb-like domain profile. 55 119 IPR001005 -
Phac4g01236 586 MobiDBLite consensus disorder prediction 191 254 - -
Phac4g01236 586 MobiDBLite consensus disorder prediction 556 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01236 Phac-Chr4 30353277 30356555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01236 58 532 Trihelix Transcription Factor Family AT1G76880 50.693 7.16e-137 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phac4g01236 Myb_DNA-bind_4 2.5e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01236 - - gmx:100807507 850.121