Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01215 ATGGAGATGAGAAGCAGTGAAGAGATAGAAATAGGAAGAGACATAACTCCAGCACTCACTCCTCTCACTTTCTCTCTCCACGATTCCAATCTCAACACTCACTGCTCCGCCTGTTTCTCTCCTCTTTCCAGCCCTTCTCCCTCCATTCCCATTCCCAATCCCCTCTTCTACTGCTCCCCTCCCTGCTCCGCCGCCCTTTCCCCCCTCCACCACTCCTCCGCCGAGACCCACCTCCCTTCCTCCGCCCATTCCTCCCACCTCCGCGCCGCCCTCCGCCTCCTCCGCTCACACCGCCCCTCCCCCTCCTTCCGCCTTGCCGGCCTCCTCTCCAACCGCCACATCCTCACCTCTCATCACCATGACCATGTCTCGGACAGGATCAGGCTCGGTGCCACCGCCATGGCTGAAGCCATCGCCGAGCAGCGCGCCGTTCCCAACGACGACGCCATTTTGGAGGAAGCTACCATTGCGTTATGCGCTGTGCTAACGAACGCCGTGGAGGTGCACGATAACGAAGGGCGCGCCCTTGGAATTGCGGTTTTCGATCCCACCTTCTCTTGGATCAACCACAGCTGCTCCCCCAACGCATGCTACCGTTTCATCCTATCTTCTTCTCCTTCCAATGAACCTGAACTTCTTCGCATTGCTCCACATCCACAAATGGGTAGTGGTGGGGTGTGTGTTAGCAGTGATGAATTTGCCAAAGAGGTGTTGGGTTATGGCCCTAGATTGGTTGTGAGGAGTATCAAGAAAATTAAAAAGGGAGAAGAGGTCACTGTAGCCTATACGGATATCTTGCAGACCAAGGCAACGAGACAGTGGGAGCTATGGTCAAAGTATAGGTTTGTTTGTTGTTGCAAACGATGTAGTGATCTTCCTTTGTCATACGTGGATCATGCATTGCAAGAAATTTCAGCTTTCAGTTATGATTCAACAACTTCATATTCCATGTTCCTCAAAGACATGGCTGATAGAAGATTGACGGAGTGCATTGATGATGTCATATCAGAGTATCTTTCGGTTGGTGATCCTGAGTCTTGTCGTGACAAGCTTGAGAAGATACTCACGCAAGGTCTAAATGAGCAGTTAGAAGACATTAAAGAAAAATCAGATTCTAAATTCATGCTGCATCCCCTAAACCACCACTCTTTAACAGCGTACACAACACTGGCTTCAGCATATAAAGTTTGTGCTAGTGATTTATTGTCTGTAGATTCTGACATAGATATAAATCAGTTAAAGGCTTTTGACATGAGCAGGACCAGTGCTGCATATTCTCTCTTACTTGCAGGTGCAACTCATCATCTCTTCAATTCTGAATCCTCACTTATTGCATCAGTCGCAAATTTTTGGATAGGAGCTGATCCTATCAATTTCAGTTGGCTATTGTCTGCCAAAAGTTCAAGTACAATGACTCATGAACCTGAAAACAGCATCTATATTTGTGAAGGACCAACCTCCGCTGATGATGTAGTAGCATGCCTTTTACAGCTTGGTTTACACTGCTTAGCTTATGGGGGATTGTTGGGCAGTATTTGTTATGGTCCCCATTCGCACGAGGTTTGTCATGTTCAAAATGTTCTAGACCGTGAAAAGAATTTTGTATTATATTCTCGTGAAGAATCTTGA 1629 0.477 MEMRSSEEIEIGRDITPALTPLTFSLHDSNLNTHCSACFSPLSSPSPSIPIPNPLFYCSPPCSAALSPLHHSSAETHLPSSAHSSHLRAALRLLRSHRPSPSFRLAGLLSNRHILTSHHHDHVSDRIRLGATAMAEAIAEQRAVPNDDAILEEATIALCAVLTNAVEVHDNEGRALGIAVFDPTFSWINHSCSPNACYRFILSSSPSNEPELLRIAPHPQMGSGGVCVSSDEFAKEVLGYGPRLVVRSIKKIKKGEEVTVAYTDILQTKATRQWELWSKYRFVCCCKRCSDLPLSYVDHALQEISAFSYDSTTSYSMFLKDMADRRLTECIDDVISEYLSVGDPESCRDKLEKILTQGLNEQLEDIKEKSDSKFMLHPLNHHSLTAYTTLASAYKVCASDLLSVDSDIDINQLKAFDMSRTSAAYSLLLAGATHHLFNSESSLIASVANFWIGADPINFSWLLSAKSSSTMTHEPENSIYICEGPTSADDVVACLLQLGLHCLAYGGLLGSICYGPHSHEVCHVQNVLDREKNFVLYSREES* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01215 542 Gene3D - 82 165 - -
Phac4g01215 542 Gene3D - 34 81 - -
Phac4g01215 542 Gene3D SET domain 7 289 IPR046341 -
Phac4g01215 542 SUPERFAMILY SET domain 161 291 IPR046341 -
Phac4g01215 542 Pfam SET domain 183 262 IPR001214 GO:0005515
Phac4g01215 542 CDD SET_SMYD 142 289 - -
Phac4g01215 542 PANTHER PROTEIN SET DOMAIN GROUP 41 1 454 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phac4g01215 SET 1.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01215 - - pvu:PHAVU_004G094200g 813.913