Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01198 ATGTTAGGCCAAGCGATGAAGCTTTCTCCTGCCACTCCCGACCTCTCCGGTGGAAGGATTTCCATGAGGAAGACGGCCTCCAAGTCGGTTTCTTCTGGAAGCCCATGGTACGGCCCAGATCGCGTCAAGTACTTGGGCCCATTCTCCGGTGAGGCCCCTTCCTACCTCACTGGCCAATTCCCAGGTGACTACGGCTGGGACACTGCTGGCCTTTCTGCTGACCCAGAGACTTTTGCAAAAAACCGTGAACTGGAAGTCATCCACTCCAGATGGGCTATGTTGGGAGCTTTGGGTTGTGTGTTCCCGGAACTCTTGGCCCGCAACGGTGTGAAGTTCGGGGAGGCCGTGTGGTTCAAGGCTGGGTCTCAGATATTCAGTGAGGGTGGGCTTGACTACTTGGGCAACCCAAGCTTAGTCCATGCACAGAGCATCCTTGCCATCTGGGCCACACAGGTGATCTTGATGGGTGCAGTGGAGGGTTATCGCATTGCTGGTGGGCCTTTGGGTGAGGTCACTGACCCAATCTACCCGGGTGGGAGCTTCGACCCATTGGGCCTTGCTGATGACCCAGAGGCCTTTGCTGAGTTGAAGGTTAAAGAGTTGAAGAATGGGAGATTGGCCATGTTCTCCATGTTTGGTTTCTTCGTTCAAGCCATTGTCACTGGAAAGGGACCTTTGGAGAACCTTGCAGATCACCTTGCTGACCCAGTCAACAACAATGCCTGGGCCTACGCCACCAACTTTGTCCCTGGAAACTGA 759 0.5468 MLGQAMKLSPATPDLSGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEAPSYLTGQFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGN* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01198 252 Gene3D Chlorophyll a/b binding protein domain 43 245 - -
Phac4g01198 252 SUPERFAMILY Chlorophyll a-b binding protein 35 249 - -
Phac4g01198 252 Pfam Chlorophyll A-B binding protein 52 218 IPR022796 -
Phac4g01198 252 MobiDBLite consensus disorder prediction 1 33 - -
Phac4g01198 252 FunFam Chlorophyll a-b binding protein, chloroplastic 43 245 - -
Phac4g01198 252 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 6 251 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01198 Phac-Chr4 29398533 29406091 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01198 1 252 Chloroplast and Mitochondria Gene Families AT2G34430 87.402 1.19e-162 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01198 K08912 - ccaj:109815895 501.13