Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01189 ATGTCCTTGCTAACGGTGGCGTACCAAAGGGGTTCAGGTGAGTTTATCCAGTTCACCGCGGATCACGGTGGCGGTGATGATGGTGAACATGGTTATGGAGATGGTGGTGGTGGTAGTGGTAGTGGTGGTTCACCAGGACTCACTTTTAACCAAGGGATGCAACTTCAAGGGGAGGTAGCAATGCAAGGTGGTTCTTTGGTTTCAGGGTTCAACAGGGGTGATCCAGAGTTGAGGGAAATGGTTTCAGCTTTGACACACGTTGTTTCATCAGGGTCTGGACAGAGGAGCACCGAATGGATGCAGCAAAGTGGTTATTCTATGATGTCAGGTTTTGGACATGCACCTTCTCTTTCTCGTTTGTCTTCTTTCTCTTCTCCTTCTCCTACTTCTGGCCCCTCTGGTGTTGGTCAGAAAAGAGGGAGAGAAGAACAAGAGACTAATACCTCTTCTTCTCATAACTTGATGCAACAACAAAGTGCTCCAAGACTCTTCAGAACCGTTGGTGACTTCATGCTGCCTTCTCAAGGAGACTCATCTTCAGTGACTGAAGAAGCTCCCACCTCCACAACTACTACTGTAACAGCAGTGACAACGGCTGTTACTGAAACTACACCAGGAGGTGGAGAAAGGAGGAGAAAGTACAGGGGAGTGAGACAGAGGCCTTGGGGGAAATGGGCAGCTGAAATCCGTGATCCACACAAAGCAGCAAGAGTTTGGCTTGGCACATTTGACACTGAAGAAGCAGCAGCAAGAGCCTATGATGAAGCTGCATTGAGGTTCAGAGGCAACAGGGCAAAGCTAAACTTCCCTGAAAATGTTAGAGCAGTTCCACCTCTTCAACCTTTCCAAGCCGCCACAAGACTAACCGTTTCTGACTCTTCCACCTCTCAATTCCGGCCACTCACCGCGGCCGTGGCGGCACCACCCTTCGTTCAGCAGCCACAGATGCAGGGCTCCTCTGACTTGATCAGAGACTACTTGCAATACTCTCAACTTCTACAGACTGATTTTCAACATCAACATCAGCATCAGCATCAACAACAACCTTCTAATTTGCTTCAGCAGTTGTACTATAATGCACAATTGGCTTCACTTCAACCACCTTCATTCTCTTCTTCGGTGTCACCAACTCCATTACCATTATTCTCAACATCTGCTCAATTTTCCTCTGCTTCATTTCCCATGTTTTCAAGTCAACAAATGAGCTATTTCCAGCCACTGGAAAGCCTTCCTCCAGCCGGTGGAAGGCCGGATATTCCGCCGTCAACATGGTCCGATGCCGGTGGCCAGCCACCATCTTCTGGTTGA 1308 0.4862 MSLLTVAYQRGSGEFIQFTADHGGGDDGEHGYGDGGGGSGSGGSPGLTFNQGMQLQGEVAMQGGSLVSGFNRGDPELREMVSALTHVVSSGSGQRSTEWMQQSGYSMMSGFGHAPSLSRLSSFSSPSPTSGPSGVGQKRGREEQETNTSSSHNLMQQQSAPRLFRTVGDFMLPSQGDSSSVTEEAPTSTTTTVTAVTTAVTETTPGGGERRRKYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTEEAAARAYDEAALRFRGNRAKLNFPENVRAVPPLQPFQAATRLTVSDSSTSQFRPLTAAVAAPPFVQQPQMQGSSDLIRDYLQYSQLLQTDFQHQHQHQHQQQPSNLLQQLYYNAQLASLQPPSFSSSVSPTPLPLFSTSAQFSSASFPMFSSQQMSYFQPLESLPPAGGRPDIPPSTWSDAGGQPPSSG* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01189 435 Gene3D AP2/ERF domain 212 272 IPR036955 GO:0003700|GO:0006355
Phac4g01189 435 MobiDBLite consensus disorder prediction 116 158 - -
Phac4g01189 435 CDD AP2 213 272 IPR001471 GO:0003700|GO:0006355
Phac4g01189 435 MobiDBLite consensus disorder prediction 20 45 - -
Phac4g01189 435 PRINTS Ethylene responsive element binding protein signature 214 225 IPR001471 GO:0003700|GO:0006355
Phac4g01189 435 PRINTS Ethylene responsive element binding protein signature 236 252 IPR001471 GO:0003700|GO:0006355
Phac4g01189 435 MobiDBLite consensus disorder prediction 116 134 - -
Phac4g01189 435 SMART rav1_2 213 276 IPR001471 GO:0003700|GO:0006355
Phac4g01189 435 MobiDBLite consensus disorder prediction 406 435 - -
Phac4g01189 435 PANTHER DNA-BINDING DOMAIN 156 348 IPR044808 GO:0003700|GO:0009873
Phac4g01189 435 ProSiteProfiles AP2/ERF domain profile. 213 270 IPR001471 GO:0003700|GO:0006355
Phac4g01189 435 Pfam AP2 domain 213 262 IPR001471 GO:0003700|GO:0006355
Phac4g01189 435 FunFam Ethylene-responsive transcription factor 2 212 271 - -
Phac4g01189 435 SUPERFAMILY DNA-binding domain 213 271 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01189 Phac-Chr4 29069327 29072249 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01189 150 274 AP2-EREBP Transcription Factor Family AT5G61890 52.800 2.73e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac4g01189 AP2 3.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01189 - - vun:114180418 574.318