Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01186 ATGAGGATTATGATAAAGGGCGGTGTTTGGAAAAACACCGAAGATGAAATCCTGAAAGCTGCTGTTATGAAATATGGAAAGAACCAGTGGGCTCGAATCTCTTCGCTCCTTGTTCGCAAATCAGCCAAGCAATGCAAAGCTCGCTGGTATGAGTGGCTTGATCCCTCCATAAAAAAGACTGAGTGGACAAGAGAAGAGGACGAGAAGTTACTTCATCTTGCTAAGCTCATGCCCACTCAGTGGAGAACAATTGCTCCAATTGTAGGTCGTACACCTTCCCAATGTCTTGAGCGGTATGAGAAGCTTCTTGATGCAGCCTGTGTAAAAGATGAGAACTATGAGCCTGGTGATGATCCTCGAAAATTGCGTCCTGGGGAGATTGATCCAAACCCTGAGTCAAAACCTGCACGACCTGATCCTGTTGATATGGATGAAGATGAAAAGGAGATGCTTTCTGAAGCACGAGCCCGATTAGCCAACACAAAGGGAAAGAAAGCAAAAAGGAAAGCTAGGGAGAAACAGCTTGAGGAAGCGAGGAGGCTTGCTTCCTTACAAAAGAAGAGAGAATTGAAGGCAGCTGGAATTGATATCAGGCAGCGGAAGAGAAAAAGGAAAGGAATAGACTACAATGCAGAAATTCCATTCGAGAAAAGGCCTCCTCCAGGGTTTTTTGATGTTGCAGATGAAGATAGACCAGTGGAACAGCCAAAGTTCCCTACTACAATTGAAGAACTTGAAGGGAAAAGGAGGGTTGATGTTGAGGCACAATTAAGAAAGCAGGACATTGCAAAAAATAAAATTGCACAAAGGCAAGATGCCCCATCTGCCATATTGCATGCCAACAAATTGAATGATCCAGAAACAGTAAGAAAGAGGTCAAAATTGATGCTTCCACCACCCCAGATATCTGATCAGGAATTGGATGAAATTGCTAAGTTGGGTTATGCTAGTGACCTTGCAGGGAGTCAGGAACTTGCTGAAGGTAGTGGTGCTACACGTGCTCTTCTGGCTAATTATGCACAGACACCTGGACAAGGAGTGACTCCTTTGCGAACCCCTCAGAGAACACCAGCTGGTAAAGGAGATGCTATTATGATGGAAGCTGAAAATCTTGCCAGGTTGAGGGAGTCTCAAACACCATTGTTGGGAGGGGAGAATCCGGAGTTGCATCCTTCAGATTTTTCTGGTGTCACTCCTAAGAAAAAGGACATTCAGACTCCAAATCCAATGCTGACTCCTTCTGCAACTCCTGGAGGCATCACTCCAAGAATTGGTATGACGCCAACAAGAGATGGTTTTTCTTTTAGCATGACACCAAAGGGAACTCCTCTGAGGGATGAGCTACATATTAATGAGGACATGAATATGCATGACAGTACTAAACATGAGCTGCAGAGACAGGCTGATATAAGAAGAAGTCTGCGTTCTGGTTTAGGAAGCCTTCCACAGCCCACGAATGAGTACCAAATAGTGATGGAACCAGTTACAGAAGATGCCGAAGAGCCTGAGGAGAACATTGAAGAGGATATGTCTGACAGAATAGCTAGAAAAAAAGCGGAAGAAGAGGCAAGACAGCAGGCACTACTTAGAAAACGATCAAAGGTCCTTCAACGGGAACTTCCTAGGCCCCCTGCTGCATCATTGGAGCTTATAAGAAATTCCTTGATGAGAACTGATGGGGACAAGAGTTCCTTTGTTCCACCAACTTCTATTGAGCAGGCTGATGAGATGATTAGAAAGGAGCTTCTAACTTTACTGGAGCATGACAATGCTAAGTATCCGCTTGATGATAAAGTGAATAAGGAGAAAAAGAAAGGAGTCAAGCGGTCGGCAGACGTGTCTGCTGTCCCTGTGATAGAAGATTTCGAGGAAGATGAAATGAAAGATGCTGATAAGTTGATAAAGGAAGAAGTTCAGTATCTTTGTGCAGCAATGGGACATGAAAATGAGCCCCTTGATGAATTTATTGAAGCACATCGAACCTGCCTCCATGATCTTACGTACTTTCCTACCCGTAATGCATATGGTCTCTCCAGTGTTGCTGGGAACATGGAAAAGCTAGCAGCTTTGCAGAATGAATTTGAGAATGCGAGAAACAAGTTGGATGATGATAAGGAGAAGATGGTACGTCTTGAGAAGAAGGTGACTGTTATCACACAAGGCTACGAGATGAGAGCAAAGAAAAGTATCTGGCCGCAAATTGAGGCCACTTTCAAGCAGATGGATATAGCTGCAACCGAGTTAGAATGCTTTAAAGCTTTGCACAAGCAGGAGCAATTAGCAGCATCACAAAGGATAAACAATTTGTGGAGTGAAGTACAGAAGCAAAAGGAACTTGAAAAAATTTTGCAAAACAGGTACGGGAGTCTAGTTGAAGAGCTGGAGAAGATGCAAAATACCATTAACCAATGCAGATTCAAAGCACAGCAGCAAAAAGAAGTTGAAGCAAACAATGCTCATGCTAAGGCCAATGAGACCAAGGCGGATGAAACTGATGTGCTGGATACAGAGAGTTATAAAGTTGTACCTCACTCGGTAGAGGATGGAAATGCTCTAGCTGTAACAGTTGAGTCATCACATGATGCAACTGCTGAGCAGCAAGTAGAGATTGTGCAAGACGGGTCTACTTCTAGCCCCAGTCATGACATGAATGTGGATCCTGATAAAATGCATACAATACATGACACTGATGTTAAATTAGCAAATGCTTCACCAGCTGCTGAGAATGTTGTTGAAATAGTGGAAGGTACTAGTCCTACTGATGGTAATACTGACAATGGGGAGAACGTGTCAGAAATGGGTGCTTCAATGGAAATAAATAGCCACAATCATGATGTAGTTGCGAATGCTGTAAACACACGTGAGAGCAGCATGGAAGAAACCAGTGCTGTTACGGAGGAGACAAATTAG 2910 0.4368 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRKRKRKGIDYNAEIPFEKRPPPGFFDVADEDRPVEQPKFPTTIEELEGKRRVDVEAQLRKQDIAKNKIAQRQDAPSAILHANKLNDPETVRKRSKLMLPPPQISDQELDEIAKLGYASDLAGSQELAEGSGATRALLANYAQTPGQGVTPLRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKKKDIQTPNPMLTPSATPGGITPRIGMTPTRDGFSFSMTPKGTPLRDELHINEDMNMHDSTKHELQRQADIRRSLRSGLGSLPQPTNEYQIVMEPVTEDAEEPEENIEEDMSDRIARKKAEEEARQQALLRKRSKVLQRELPRPPAASLELIRNSLMRTDGDKSSFVPPTSIEQADEMIRKELLTLLEHDNAKYPLDDKVNKEKKKGVKRSADVSAVPVIEDFEEDEMKDADKLIKEEVQYLCAAMGHENEPLDEFIEAHRTCLHDLTYFPTRNAYGLSSVAGNMEKLAALQNEFENARNKLDDDKEKMVRLEKKVTVITQGYEMRAKKSIWPQIEATFKQMDIAATELECFKALHKQEQLAASQRINNLWSEVQKQKELEKILQNRYGSLVEELEKMQNTINQCRFKAQQQKEVEANNAHAKANETKADETDVLDTESYKVVPHSVEDGNALAVTVESSHDATAEQQVEIVQDGSTSSPSHDMNVDPDKMHTIHDTDVKLANASPAAENVVEIVEGTSPTDGNTDNGENVSEMGASMEINSHNHDVVANAVNTRESSMEETSAVTEETN* 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01186 969 MobiDBLite consensus disorder prediction 382 442 - -
Phac4g01186 969 MobiDBLite consensus disorder prediction 399 415 - -
Phac4g01186 969 CDD SANT_CDC5_II 55 106 IPR047240 -
Phac4g01186 969 FunFam CDC5 cell division cycle 5-like 5 59 - -
Phac4g01186 969 Pfam pre-mRNA splicing factor component 406 652 IPR021786 -
Phac4g01186 969 Gene3D - 5 59 - -
Phac4g01186 969 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Phac4g01186 969 FunFam CDC5 cell division cycle 5-like 60 120 - -
Phac4g01186 969 Coils Coil 680 714 - -
Phac4g01186 969 MobiDBLite consensus disorder prediction 113 149 - -
Phac4g01186 969 Coils Coil 167 187 - -
Phac4g01186 969 SMART sant 58 105 IPR001005 -
Phac4g01186 969 SMART sant 6 55 IPR001005 -
Phac4g01186 969 Coils Coil 780 800 - -
Phac4g01186 969 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Phac4g01186 969 Gene3D - 60 114 - -
Phac4g01186 969 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 801 IPR047242 GO:0000398|GO:0000974
Phac4g01186 969 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Phac4g01186 969 Pfam Myb-like DNA-binding domain 10 70 - -
Phac4g01186 969 CDD SANT 10 53 IPR001005 -
Phac4g01186 969 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Phac4g01186 969 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01186 Phac-Chr4 28751224 28757926 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01186 1 833 MYB-Related Transcription Factor Family AT1G09770 75.566 0.0 1234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac4g01186 Myb_Cef 9.1e-63 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01186 K12860 - gmx:100801352 1612.05