Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01176 ATGAATGGCAGTAAGGGTGACTTATCTGTCAACTTTTCCACTATTACACCCAAAAAACCAAACTCTGCCTTACGTAAAGTTGCCAGAGTACGCTTAACCTCTGGATTTGAAATTACTGCTTATATACCCGGTATTGGCCATAATTTACAAGAACATTCTGTAGTCCTAGTAAGAGGGGGGAGGGTTAAAGATTTACCCGGTGTGAGATATCACATTGTTCGAGGAACCCTAGATGCTGTCGGAGTAAAGGATCGTCAACAAGGGCGCTACCATGAGACAAAAGATTTTCTTTCTAAAGAAATTCGATTCGGAACTATGATATGTCCAAGGTCCAATATGGAAAGAATTTCAGAGGTTTTCCTTGACTTTGTCCGTGTCAACAAACAATTCGAAATGCCTCGACTTTTTTAG 411 0.4039 MNGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRYHETKDFLSKEIRFGTMICPRSNMERISEVFLDFVRVNKQFEMPRLF* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01176 136 ProSitePatterns Ribosomal protein S12 signature. 18 25 IPR006032 GO:0003735|GO:0005840|GO:0006412
Phac4g01176 136 SUPERFAMILY Nucleic acid-binding proteins 10 90 IPR012340 -
Phac4g01176 136 Gene3D - 2 100 IPR012340 -
Phac4g01176 136 NCBIfam 30S ribosomal protein S12 8 90 IPR005679 GO:0003735|GO:0006412|GO:0015935
Phac4g01176 136 CDD Ribosomal_S12 14 85 IPR005679 GO:0003735|GO:0006412|GO:0015935
Phac4g01176 136 PRINTS Ribosomal protein S12 signature 33 52 IPR006032 GO:0003735|GO:0005840|GO:0006412
Phac4g01176 136 PRINTS Ribosomal protein S12 signature 52 69 IPR006032 GO:0003735|GO:0005840|GO:0006412
Phac4g01176 136 PRINTS Ribosomal protein S12 signature 17 32 IPR006032 GO:0003735|GO:0005840|GO:0006412
Phac4g01176 136 PRINTS Ribosomal protein S12 signature 69 85 IPR006032 GO:0003735|GO:0005840|GO:0006412
Phac4g01176 136 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 14 95 IPR006032 GO:0003735|GO:0005840|GO:0006412
Phac4g01176 136 Pfam Ribosomal protein S12/S23 10 93 IPR006032 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01176 15 74 Cytoplasmic Ribosomal Protein Gene Family AT3G09680 44.118 1.48e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01176 K02950 - soe:130461791 176.407