Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01056 ATGGAAGATTCAGAGGGAGAAGAGCTTCTAAATCTTACTCTTTCGGTTGCTGCAGGTAGGGAGAGGAAAAAGAAAGGAAGGACAAGGGATGATAATACTAATTCTCTTGTTATTCCTATGAAGTCCCGTGAAGGGTATGAAGGGAAGATCTTTAGGCTCCTCCAAATGAGGGAGCTAATGCTAAGAGAAGATCACAGAAGAAAAGGAGTAGTTGAAGATGTGAATAATGGCCTTCCTTTGATTCATTTGCTTCTTTCAACTGCCACTTCTATTGATGAGAGAAACTACTGTGCAACTCTAGAGAATCTCATTGAGTTGTACCAAACAGTTTCCCTAATAGGTGATTCAGTTCAACGTGTGGTTGCCTATTTTGCTGACGGTTTGGCTGCAAGGCTTCTCACAAGAAAGTCCCCTTTCTATGACATGGTCATGGAGGAACCTACAAGTGAGGAAGAGTTTCTTGCATTCACAGATCTCTATAGAGTCTCACCCTATTACCAATTTGCTCACTTCACAGCAAACCAGGCTATTTTGGAGGCCTATGAGGAGGAGGAAGAGAGGAACAACAAATCACTTCATGTCATTGATTTTGATGTCTCCTATGGCTTCCAATGGCCTTCTCTTATTCAATCACTTTCTGAAAAGGCAACCAGTGGCAACAGAATATCCCTCAGGATAACAGGTTTTGGGAACAACCTGAAAGAACTGCAAGAAACTGAGGCCAGGTTAGTTAGTTTCTCAAAGGGGTTTAGTAACCACCTAGTGTTTGAATTCCAAGGGCTTCTAAGAGGCTCATCAAGGCTCATCAACCTAAGGAAAAGGAAAAATGAAACTTTGGCAGTGAACCTTGTTTCTTACTTAAACACTTTGACTAGTTTCATGAAGGTCTCGGACACATTAGAACTTGTTCATTCTCTTAGCCCCTCCATTGTGGTGTTGGTGAAACAAGAAGGTAGCAGGAATTTGAAGACCTTCTTGTCAAGGTTCACTGAGTCTTTGCACTATTTTGCAGCCATGTTCGATTCACTAGATGATTGCTTGCCACTTGAAAGCACTGAGAGATTGAGGATTGAGAAGAAGCTTTTGGGGAAAGAGATCAAAAGCATGCTCAACTATGACATGGATGGTGTGGATTGCCCAAAGTATGAGAGGATGGAAACATGGAAAACAAGAATGGAGAATCATGGATTTGTGGGAAGAAAAATTAGCTCAAAGTGTGTGATCCAAGCAAAGCTGCTTCTGAAGATGAGGACCCATTATTATCCCCTACAGTTTGAGGAAGAGGGTGGAAGTGGGGGTTTCAGAGTTTCTGAAAGGGATGAAGGAAGAGTTATCTCTTTGGGATGGCAAAATAGGTTTCTTCTCACAGTCTCAGCATGGCAACCAATTTGA 1392 0.4203 MEDSEGEELLNLTLSVAAGRERKKKGRTRDDNTNSLVIPMKSREGYEGKIFRLLQMRELMLREDHRRKGVVEDVNNGLPLIHLLLSTATSIDERNYCATLENLIELYQTVSLIGDSVQRVVAYFADGLAARLLTRKSPFYDMVMEEPTSEEEFLAFTDLYRVSPYYQFAHFTANQAILEAYEEEEERNNKSLHVIDFDVSYGFQWPSLIQSLSEKATSGNRISLRITGFGNNLKELQETEARLVSFSKGFSNHLVFEFQGLLRGSSRLINLRKRKNETLAVNLVSYLNTLTSFMKVSDTLELVHSLSPSIVVLVKQEGSRNLKTFLSRFTESLHYFAAMFDSLDDCLPLESTERLRIEKKLLGKEIKSMLNYDMDGVDCPKYERMETWKTRMENHGFVGRKISSKCVIQAKLLLKMRTHYYPLQFEEEGGSGGFRVSERDEGRVISLGWQNRFLLTVSAWQPI* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01056 463 Pfam GRAS domain family 80 461 IPR005202 -
Phac4g01056 463 ProSiteProfiles GRAS family profile. 71 461 IPR005202 -
Phac4g01056 463 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 77 456 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01056 Phac-Chr4 15848194 15849991 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01056 66 461 GRAS Transcription Factor Family AT1G14920 33.252 8.55e-55 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac4g01056 GRAS 6.6e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01056 - - gmx:100778791 787.719