Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01050 ATGGGCAGGTATGACTACCCTTCAACATCTTTCCTTGCTGTTGTTTTGTTCCTCTTTTGTTTCTGTCCCATGGTGTTGTCCCTGCTACCACAAAACCAAACAGAAGCCATGAACAATCTCTCAAAGAATCTTACTCCCACTGTTCCCTGGAGTGGCTCAGACCCATGTGCATGGAAGGGAGTGAGTTGTGACCCTGCAAACTCCTCTGTAGTAGGGATTTCTTTATCTGGTTTTTCACTCCCTTCTTCTGACTTTCTGCCTCTTGTTTGCAAAATTGAAACTTTGGAGCATCTTGATGTCTCCAAAAACCGTCTGAGCTCAATCCCTGATGGTTTCATCACTGAGTGTGGAAAGATAAAGGGGTTGAAGCTGTTGAATTTCAGTGTTAACAAGTTAGAAGGTGTTTTACCTACTTTTTATGGCTTTGAGGCATTGGAATCCCTGGATATGTCTTTCAATGTGATGGGAGGGAATATTGTTTTGGAGATAGATGGGTTGGTTAGCCTCAAAAGTTTGAATCTTACTTTCAATGGATTCAGTGGGTCTCTTCCTACCAAATTGGGAAAGTCCATGGTTTTGGAGCACCTTCTGCTTTCTAACAATAGCTTTGATGGCAAAATCCCTGATGAATTATTGAGTTATGAAAACTTGACGTGGATTGATCTTAAGAACAATAAACTTTCACAGTCTATTCCTATTAATATTGGGAATCTTTCTAAATTGGAAACTTTGATCCTTTCCACTAATAACCTCACTGGTGAAATTCCAACTTCACTAGTGAACATCACCAAACTTTCAAGATTTGCAGCAAGTGAGAACAGGTTCACAGGTTCTATACCTTCTGGGATCACAAAATATCTCACGAGTTTGGATCTTAGTTATAATAATCTGTCTGGAGCCATTCCAGAAGACCTTTTATCTCCACCACAGTTGCAGGTTGTAGATTTGTCCAATAATTTTTTAAATGGGCCTTTACCTAGGAAGGTTTCTCTAAACTTGTTCAGGTTGAGGCTTGGGAGCAATCAGCTGAGTGGAAACATTCCTTCAGATGCTTTTGTAGGAGTTCATAATTTGACATACTTGGAGCTGGATAACAATATCTTAACAGGATCGATACCAGCTGAATTGGGTTCTTGCTGGAGTTTGGCATTGTTGAATTTAGCTCAGAATCGGTTGAGTGGTGTATTGCCACAACAGCTTGGTAATCTTACCGATCTCCAGGGGTTGCAGCTCCAATTTAACAATCTTAATGGAACTATCCCAACTCAAATTGGCCAACTTCAGAAGTTGTTAACCCTGAATTTGAGCCGGAATTCTCTGGGTGGATCAATTCCATCTGAGATTACAAAGTTAAGCAAGCTTAATTTCCTGTACTTGCAAGGCAACAATCTTAGTGGTTCCATACCGACATCCATTGGCAACTTGAGCCGTCTTTTAGTACTCCAACTTGGGGAAAACCACCTAAGAGGTGTGATTCCAAACATGCAATTGGATCTGCTGGCTACATTGAATCTTAGTAGCAACCTCTTTAGTGGTCCTATTCCTAGAAGTTTTGGTGGTTTGAGTACCCTGGAAGTCTTGGATCTCTCAAATAACAGCTTTTCTGGTCGAATTCCTGATTATCTTACTAAAATGCAGTATTTGACTCGGTTGATACTTTCTAACAATCCTCTGTCTGGTGAAATCCCAAAATTCAGTCACAATGTTAATGTTGAATATTTTGGAACTGGTCTAAAAAATAATACTGAACAGGACAACCGAAATTCCAACACGGAGTCCAAGAAGAATGGAATATCCCTTGCAGTAGCGATTCTCATTGCAATTGTAGCAGCTATTTTTCTTGTTGGCCTAGTCACTCTGTTGGTGGTGTCAGCATCACGCCTTTATCACAGGGTTAGTGACGAGCATTCACAGTCAAGAGACAATCGTCAGCATCCTCAGATCATGCAAAGTAATTTGTTAACTCCTAATGGAATGCATAGATCAAATATTGACTTCTCCAAAGCCATGGAAGCTGTTGCTGAAACATCAAATGTTACTCTTAAAACAAGGTTTTCAACTTATTATATGGCTGTCATGCCGTCTGGTTCAACCTATTATGTCAAGAAACTGAACTGGGTTGACAAGATATTCCAATTGGGAAGTCATGATAATTTTGTTAAAGAGGTAGAAGTATTGGCAAAATTGAACAATTCCAATGTCATGACTCCTTTGGCCTATGTTCTGTCCACTGACACTGCTTATATACTATACGAGTATATCTCAAATGGCTCCCTCTTTGATGTTCTTCATGGAAGCATGGATGTGTCTTTAGATTGGGCTAGCAGATACAGTATAGCTGTTGGAGTGGCTCAAGGACTTTCTTTTCTTCATGGATTCGCCTCTAGTCCAATACTACTCCTTGACCTGTCAAGTAAAAGTATTATGCTCAAGTCCCTCAAGGAGCCTCTAGTTGGGGATATTGAACACTACAAGGTCATTGATCCCTCAAAGAGTACGGGGAACTTTTCTGCAGTCGCTGGTTCAGTTGGCTATATTCCTCCAGAGTATGCATACACAATGACAGTAACAATGGCTGGGAATGTCTACAGCTTTGGTGTGATTCTTCTTGAACTGCTGACAGGAAAACCTGCAGTGACTGAGGGAACGGAATTGGTCAAGTGGGTTTTGCGTAACTCCACAAACCAAGATTACATTCTTGACTTTAATGTCAGTAGAACATCACAAGCAGTCAGAAACCAGATGCTTGCAATTCTTGAGATTGCTCGTGTTTGTGTTAGTACATCCCCAGAATCAAGACCAAAGATGAAGAGTGTGCTGAGGATGCTCTTAAATGCTAGATGA 2844 0.4065 MGRYDYPSTSFLAVVLFLFCFCPMVLSLLPQNQTEAMNNLSKNLTPTVPWSGSDPCAWKGVSCDPANSSVVGISLSGFSLPSSDFLPLVCKIETLEHLDVSKNRLSSIPDGFITECGKIKGLKLLNFSVNKLEGVLPTFYGFEALESLDMSFNVMGGNIVLEIDGLVSLKSLNLTFNGFSGSLPTKLGKSMVLEHLLLSNNSFDGKIPDELLSYENLTWIDLKNNKLSQSIPINIGNLSKLETLILSTNNLTGEIPTSLVNITKLSRFAASENRFTGSIPSGITKYLTSLDLSYNNLSGAIPEDLLSPPQLQVVDLSNNFLNGPLPRKVSLNLFRLRLGSNQLSGNIPSDAFVGVHNLTYLELDNNILTGSIPAELGSCWSLALLNLAQNRLSGVLPQQLGNLTDLQGLQLQFNNLNGTIPTQIGQLQKLLTLNLSRNSLGGSIPSEITKLSKLNFLYLQGNNLSGSIPTSIGNLSRLLVLQLGENHLRGVIPNMQLDLLATLNLSSNLFSGPIPRSFGGLSTLEVLDLSNNSFSGRIPDYLTKMQYLTRLILSNNPLSGEIPKFSHNVNVEYFGTGLKNNTEQDNRNSNTESKKNGISLAVAILIAIVAAIFLVGLVTLLVVSASRLYHRVSDEHSQSRDNRQHPQIMQSNLLTPNGMHRSNIDFSKAMEAVAETSNVTLKTRFSTYYMAVMPSGSTYYVKKLNWVDKIFQLGSHDNFVKEVEVLAKLNNSNVMTPLAYVLSTDTAYILYEYISNGSLFDVLHGSMDVSLDWASRYSIAVGVAQGLSFLHGFASSPILLLDLSSKSIMLKSLKEPLVGDIEHYKVIDPSKSTGNFSAVAGSVGYIPPEYAYTMTVTMAGNVYSFGVILLELLTGKPAVTEGTELVKWVLRNSTNQDYILDFNVSRTSQAVRNQMLAILEIARVCVSTSPESRPKMKSVLRMLLNAR* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01050 947 Gene3D Ribonuclease Inhibitor 188 284 IPR032675 -
Phac4g01050 947 FunFam Leucine-rich repeat receptor-like protein kinase TDR 288 583 - -
Phac4g01050 947 Gene3D Ribonuclease Inhibitor 285 583 IPR032675 -
Phac4g01050 947 ProSiteProfiles Protein kinase domain profile. 674 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g01050 947 ProSiteProfiles Leucine-rich repeat profile. 94 115 IPR001611 GO:0005515
Phac4g01050 947 SUPERFAMILY Protein kinase-like (PK-like) 685 943 IPR011009 -
Phac4g01050 947 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 31 186 - -
Phac4g01050 947 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 642 753 - -
Phac4g01050 947 PANTHER OS05G0588300 PROTEIN 192 305 - -
Phac4g01050 947 Pfam Leucine rich repeat N-terminal domain 31 64 IPR013210 -
Phac4g01050 947 SUPERFAMILY L domain-like 41 326 - -
Phac4g01050 947 FunFam Leucine-rich repeat receptor protein kinase EMS1 207 287 - -
Phac4g01050 947 Pfam Protein kinase domain 685 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g01050 947 FunFam leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 754 947 - -
Phac4g01050 947 PRINTS Leucine-rich repeat signature 521 534 - -
Phac4g01050 947 PRINTS Leucine-rich repeat signature 287 300 - -
Phac4g01050 947 SUPERFAMILY RNI-like 255 564 - -
Phac4g01050 947 Pfam Leucine rich repeat 94 153 IPR001611 GO:0005515
Phac4g01050 947 Pfam Leucine rich repeat 406 464 IPR001611 GO:0005515
Phac4g01050 947 Pfam Leucine rich repeat 500 558 IPR001611 GO:0005515
Phac4g01050 947 SMART LRR_typ_2 92 115 IPR003591 -
Phac4g01050 947 SMART LRR_typ_2 238 262 IPR003591 -
Phac4g01050 947 SMART LRR_typ_2 521 545 IPR003591 -
Phac4g01050 947 SMART LRR_typ_2 332 354 IPR003591 -
Phac4g01050 947 SMART LRR_typ_2 403 427 IPR003591 -
Phac4g01050 947 SMART LRR_typ_2 287 308 IPR003591 -
Phac4g01050 947 SMART LRR_typ_2 451 475 IPR003591 -
Phac4g01050 947 SMART LRR_typ_2 355 379 IPR003591 -
Phac4g01050 947 SMART LRR_typ_2 166 190 IPR003591 -
Phac4g01050 947 Gene3D Ribonuclease Inhibitor 31 187 IPR032675 -
Phac4g01050 947 Gene3D Phosphorylase Kinase; domain 1 635 753 - -
Phac4g01050 947 Gene3D Transferase(Phosphotransferase) domain 1 754 947 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01050 Phac-Chr4 15737026 15741198 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01050 145 947 Receptor kinase-like Gene Family AT2G41820 37.754 1.76e-148 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac4g01050 Pkinase 4.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01050 - - gmx:100796647 1372.45