Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00995 ATGAACGACCTTCTAACGGAATCATTTGAAATCCCGCGTGGCCACGGAGGTGGTGACATTGAGTTAGGAGAATATGCGAGGAATTCAGGAGAACTGGGCTTGGAAAGTTTCTTCAGAAAGGTTCAAGAGCTTGATAAGCAATATGCTAAACTGGATAAGCTTTTGAAAAATCTCCAGGATGCCCATGAGGAAGCCAAAGCTGTAACTAAGGCTCCTTCCATGAAGGCTTTAAAGCAGAAAATGGAGAAAGATGTTGATGAAGTTAAGAAAACTGCATATTACATAAAAACCAGAATTGAAGAATTGGACAAAGAGAATTTGGCAAACAGGCAGAAGTCTGGATGCGGAAAAGGTTCAGGTGTTGACCGCTCAAGAACAGCAACAACCATTTCTTTAAAAAAGAAACTAAAAGATAAAATGGCAGAATTTCAGACCCTAAGAGAGGTCATCCATCAAGAGTACCGCGAGGTTGTTGAGAGACGAGTTTTTACAGTTACGGGCACAAGAGCTGATGAGGAGACAATTGACAGATTAATTGAAACTGGAGATAGTGAACAAATTTTCCAGAAGGCAGTTCAGGAACAAGGGCGAGGCCAGATAATGAACGCCTTGGCTGAAATACAAGAGCGACATGAAGCAGTTAGAGATGTTGAGAGAAAGCTTCTTGAGCTACAACAGATATTTCTGGATATTGCGGTGTTAGTGGATGCACAAGGAGACATGCTTGACAACATCGAAACACAGGTTTCAAGTGCAGTCGATCACGTGCAGCAAGGTAACAAAGCCCTCCTAACGGCCAAGAAACATCAAAAGAACTCTAGAAAATGGATGTGTGTTGCAATCTTGATACTTCTCATCTTTATTATAATCACTGTTATCACTGTCATCAAACCATGGGCTAGCAAAAATGGTGCATAA 918 0.4139 MNDLLTESFEIPRGHGGGDIELGEYARNSGELGLESFFRKVQELDKQYAKLDKLLKNLQDAHEEAKAVTKAPSMKALKQKMEKDVDEVKKTAYYIKTRIEELDKENLANRQKSGCGKGSGVDRSRTATTISLKKKLKDKMAEFQTLREVIHQEYREVVERRVFTVTGTRADEETIDRLIETGDSEQIFQKAVQEQGRGQIMNALAEIQERHEAVRDVERKLLELQQIFLDIAVLVDAQGDMLDNIETQVSSAVDHVQQGNKALLTAKKHQKNSRKWMCVAILILLIFIIITVITVIKPWASKNGA* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00995 305 CDD SNARE_syntaxin1-like 203 265 - -
Phac4g00995 305 Pfam Syntaxin 36 239 IPR006011 GO:0016020
Phac4g00995 305 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 204 266 IPR000727 -
Phac4g00995 305 Gene3D - 191 297 - -
Phac4g00995 305 SMART SynN_4 29 155 IPR006011 GO:0016020
Phac4g00995 305 FunFam Syntaxin 132 197 297 - -
Phac4g00995 305 Gene3D - 32 158 - -
Phac4g00995 305 PANTHER SYNTAXIN 37 285 IPR045242 -
Phac4g00995 305 SMART tSNARE_6 199 266 IPR000727 -
Phac4g00995 305 SUPERFAMILY t-snare proteins 33 259 IPR010989 GO:0016020|GO:0016192
Phac4g00995 305 ProSitePatterns Syntaxin / epimorphin family signature. 210 249 IPR006012 GO:0005484|GO:0006886|GO:0016020
Phac4g00995 305 CDD SynN 34 191 IPR006011 GO:0016020
Phac4g00995 305 Pfam SNARE domain 240 292 IPR000727 -
Phac4g00995 305 Coils Coil 34 71 - -
Phac4g00995 305 FunFam Syntaxin 132 29 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00995 Phac-Chr4 14701761 14708859 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00995 1 305 SNARE and Associated Proteins AT3G03800 72.549 4.25e-154 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00995 K08486 - gmx:100306329 521.931