Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00958 ATGGACATGGATGTTTGCCGAAATGTATCAGTTTCTAGTGAGCTTCCCACCCTTGATGACCTTTTCTCACATCAGAACATGGAAGTGGATTTTGGCATGGAATGGTTGTCTGTGTTTGTGGAAGACTGTTTTTCCAGTAAGCCAAGTTGCCTCTTGGCACCCACTGGTGTTCAAACCACAAGCACTAGCACCAAGCCTTCGAGCACAATGCAAAGACCCCAACAAAGTTACTGTCATTTGCAGAATTTTGTTGTGCCAGGGAAAGCCAGGAGCAAGAGGAAGAGGCTTTCAGCACCTAGGACAAAACACACTCTAAGCACATGGTCGCATAATTTTAGCTCTGAAGTGTTGTGTTCTGACCCTCCTCTGTTGAAACAAGCCTATTGGTTGGCTGATAGTGAACTCATTGTCCCAAAGAAGAAGGATGAGCAAGAAGTGAAAGTGGAGATTGTGGTGAGGAAGGAGAAATTGGGGGAGTGTTGTGATGAGGTTGAAGTTAACAATAGTAGTAATAATAATAATGGGCAGCACCCAATTCCCAGAAGGTGCACACATTGTCTGTCTCAGAGGACCCCACAGTGGAGGGCAGGACCATTGGGTCCAAAGACACTATGTAATGCATGTGGTGTGAGGTACAAGTCTGGAAGGTTGTTGCCAGAGTATAGGCCAGCCAAGAGCCCTACTTTTGTTAGCTATTTGCATTCCAATTCACATAAGAGAGTCATGGAGATGAGAATGAGTGTTCTATCTTCTGAGAAGGAGTGA 765 0.4523 MDMDVCRNVSVSSELPTLDDLFSHQNMEVDFGMEWLSVFVEDCFSSKPSCLLAPTGVQTTSTSTKPSSTMQRPQQSYCHLQNFVVPGKARSKRKRLSAPRTKHTLSTWSHNFSSEVLCSDPPLLKQAYWLADSELIVPKKKDEQEVKVEIVVRKEKLGECCDEVEVNNSSNNNNGQHPIPRRCTHCLSQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKRVMEMRMSVLSSEKE* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00958 254 ProSiteProfiles GATA-type zinc finger domain profile. 181 213 IPR000679 GO:0006355|GO:0043565
Phac4g00958 254 SMART GATA_3 177 231 IPR000679 GO:0006355|GO:0043565
Phac4g00958 254 ProSitePatterns GATA-type zinc finger domain. 183 208 IPR000679 GO:0006355|GO:0043565
Phac4g00958 254 CDD ZnF_GATA 182 229 IPR000679 GO:0006355|GO:0043565
Phac4g00958 254 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 179 241 - -
Phac4g00958 254 PANTHER GATA TRANSCRIPTION FACTOR 11 250 - -
Phac4g00958 254 Pfam GATA zinc finger 183 217 IPR000679 GO:0006355|GO:0043565
Phac4g00958 254 FunFam GATA transcription factor 171 254 - -
Phac4g00958 254 Gene3D - 173 252 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00958 Phac-Chr4 14190523 14192798 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00958 33 245 C2C2-Gata Transcription Factor Family AT4G32890 40.909 2.06e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Phac4g00958 GATA 1.7e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00958 - - pvu:PHAVU_004G079200g 500.36