Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00951 ATGTACTATCAGCAGCAGCAACAACCTAGAAACATGCATGCTTTAAGGATGAACAGCCCCACTGAGAGGCATATGATTATGCAAGGAGGCAATGGGACTGGTGATTCAGGACTTGTTCTCTCAACTGATGCTAAGCCTAGACTAAAATGGACACCAGATCTTCATGAACGGTTCATAGAAGCAGTCAATCAACTTGGAGGAGCAGACAAAGCTACACCAAAAACAGTTTTGAAACTGATGGGGATTCCTGGACTTACTCTCTACCACTTAAAAAGTCATCTACAGAAGTACAGAATCAGTAAAAATATGCACGGACAAACCAATACTGGCAATAATAAAATTGAAGCAACAGGCAGAATGTCAGATGCAAGTGGAATTCAAATGAAACATTTAAGTATAGGCCTACAGACAAACAAAAATTCAGAAATAAATGATGCGTTACAGATGCAAATTGAAGTCCAAAGAAGACTGCATGAGCAGCTTGAGGTACAGCGGCACTTGCAGCTAAGGATAGAGGCACAAGGGAAGTACCTGCAGGCAGTGTTGGAAAAGGCACAAGAAACACTAGGAAGACAAAATTTAGGTGCTGAGGGAGTTGAAGCTGCCAAAGTTCAATTATCTGAACTGGCATCAAGAGTATCCTCTCAAAGTCTAGACACTAAATTTTCAGAACTGAAAGAATTACCGGTCCTGTGGCCTCATCAAACACAAGAGGGCCAAGCCACTGACTGTTCAATGGGTAGTTTCTTGACCTATAGTGAGGAATCTCAAAGAAACAGAGAAACACATAAAATGAGCCTGAATCTGATAGCCTACAATGGACCTCCATTTTCAGTTTCGAAAGGTTGTGTGGAAGAGTCAGTGCATTTAAAGCCTGGTCTCACATTGAGTGAAGAAGTGAAGGAGAATATGATGTTTCTTTCCTCATCAAGTGATAGTAAAGTGGTGAAGGGAGATTTTTTACAAGAAAGGCCCTCAAGCCTCTTATCCATGAATGTTGGTGTTCTAGAAGAGGAAAAATTTGGGAGAACAACTCTTTCAAAGGAAGAAGGCTGGAAGGTAAGAGACAGCACTGAAACGGAGAGAATGGCTGTTAAATTGAACCATGAGAAGATTTCTACTACAGACTATAGACTTGCAAACTTTGAAGTGAAACTAGATCTGAATTCCCATGATGATAATGATGCTTCTTCCCACTGCCAACAATTTGATTTGAATGGATTCAGCTGGAATTGCTAG 1239 0.4084 MYYQQQQQPRNMHALRMNSPTERHMIMQGGNGTGDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVLKLMGIPGLTLYHLKSHLQKYRISKNMHGQTNTGNNKIEATGRMSDASGIQMKHLSIGLQTNKNSEINDALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGAEGVEAAKVQLSELASRVSSQSLDTKFSELKELPVLWPHQTQEGQATDCSMGSFLTYSEESQRNRETHKMSLNLIAYNGPPFSVSKGCVEESVHLKPGLTLSEEVKENMMFLSSSSDSKVVKGDFLQERPSSLLSMNVGVLEEEKFGRTTLSKEEGWKVRDSTETERMAVKLNHEKISTTDYRLANFEVKLDLNSHDDNDASSHCQQFDLNGFSWNC* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00951 412 Pfam MYB-CC type transfactor, LHEQLE motif 142 188 IPR025756 -
Phac4g00951 412 SUPERFAMILY Homeodomain-like 44 100 IPR009057 -
Phac4g00951 412 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 102 IPR017930 -
Phac4g00951 412 Coils Coil 144 164 - -
Phac4g00951 412 Pfam Myb-like DNA-binding domain 47 98 IPR001005 -
Phac4g00951 412 Gene3D - 44 102 - -
Phac4g00951 412 NCBIfam myb-like DNA-binding domain, SHAQKYF class 45 100 IPR006447 GO:0003677
Phac4g00951 412 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 267 IPR044848 GO:0003700
Phac4g00951 412 FunFam Myb family transcription factor 44 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00951 Phac-Chr4 14044622 14048050 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00951 77 411 G2-like Transcription Factor Family AT3G04030 49.123 2.75e-86 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac4g00951 Myb_DNA-binding 4.8e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00951 - - gmx:100786282 719.153