Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00950 ATGTACTATCAGCAGCAGCAACAACCTAGAAACATGCATGCTTTAAGGATGAACAGCCCCACTGAGAGGCATATGATTATGCAAGGAGGCAATGGGACTGGTGATTCAGGACTTGTTCTCTCAACTGATGCTAAGCCTAGACTAAAATGGACACCAGATCTTCATGAACGGTTCATAGAAGCAGTCAATCAACTTGGAGGAGCAGACAAAGCTACACCAAAAACAGTTTTGAAACTGATGGGGATTCCTGGACTTACTCTCTACCACTTAAAAAGTCATCTACAGAAGTACAGAATCAGTAAAAATATGCACGGACAAACCAATACTGGCAATAATAAAATTGAAGCAACAGGCAGAATGTCAGATGCAAGTGGAATTCAAATGAAACATTTAAGTATAGGCCTACAGACAAACAAAAATTCAGAAATAAATGATGCGTTACAGATGCAAATTGAAGTCCAAAGAAGACTGCATGAGCAGCTTGAGCAGGTACAGCGGCACTTGCAGCTAAGGATAGAGGCACAAGGGAAGTACCTGCAGGCAGTGTTGGAAAAGGCACAAGAAACACTAGGAAGACAAAATTTAGGTGCTGAGGGAGTTGAAGCTGCCAAAGTTCAATTATCTGAACTGGCATCAAGAGTATCCTCTCAAAGTCTAGACACTAAATTTTCAGAACTGAAAGAATTACCGGTCCTGTGGCCTCATCAAACACAAGAGGGCCAAGCCACTGACTGTTCAATGGGTAGTTTCTTGACCTATAGTGAGGAATCTCAAAGAAACAGAGAAACACATAAAATGAGCCTGAATCTGATAGCCTACAATGGACCTCCATTTTCAGTTTCGAAAGGTTGTGTGGAAGAGTCAGTGCATTTAAAGCCTGGTCTCACATTGAGTGAAGAAGTGAAGGAGAATATGATGTTTCTTTCCTCATCAAGTGATAGTAAAGTGGTGAAGGGAGATTTTTTACAAGAAAGGCCCTCAAGCCTCTTATCCATGAATGTTGGTGTTCTAGAAGAGGAAAAATTTGGGAGAACAACTCTTTCAAAGGAAGAAGGCTGGAAGGTAAGAGACAGCACTGAAACGGAGAGAATGGCTGTTAAATTGAACCATGAGAAGATTTCTACTACAGACTATAGACTTGCAAACTTTGAAGTGAAACTAGATCTGAATTCCCATGATGATAATGATGCTTCTTCCCACTGCCAACAATTTGATTTGAATGGATTCAGCTGGAATTGCTAG 1242 0.409 MYYQQQQQPRNMHALRMNSPTERHMIMQGGNGTGDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVLKLMGIPGLTLYHLKSHLQKYRISKNMHGQTNTGNNKIEATGRMSDASGIQMKHLSIGLQTNKNSEINDALQMQIEVQRRLHEQLEQVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGAEGVEAAKVQLSELASRVSSQSLDTKFSELKELPVLWPHQTQEGQATDCSMGSFLTYSEESQRNRETHKMSLNLIAYNGPPFSVSKGCVEESVHLKPGLTLSEEVKENMMFLSSSSDSKVVKGDFLQERPSSLLSMNVGVLEEEKFGRTTLSKEEGWKVRDSTETERMAVKLNHEKISTTDYRLANFEVKLDLNSHDDNDASSHCQQFDLNGFSWNC* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00950 413 SUPERFAMILY Homeodomain-like 44 100 IPR009057 -
Phac4g00950 413 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 268 IPR044848 GO:0003700
Phac4g00950 413 NCBIfam myb-like DNA-binding domain, SHAQKYF class 45 100 IPR006447 GO:0003677
Phac4g00950 413 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 102 IPR017930 -
Phac4g00950 413 Coils Coil 144 164 - -
Phac4g00950 413 Gene3D - 44 102 - -
Phac4g00950 413 Pfam Myb-like DNA-binding domain 47 98 IPR001005 -
Phac4g00950 413 Pfam MYB-CC type transfactor, LHEQLE motif 142 189 IPR025756 -
Phac4g00950 413 FunFam Myb family transcription factor 44 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00950 Phac-Chr4 14044622 14048050 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00950 77 412 G2-like Transcription Factor Family AT3G04030 48.980 1.94e-84 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac4g00950 Myb_DNA-binding 4.8e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00950 - - gmx:100786282 725.702