LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac4g00949	ATGTCAGATGCAAGTGGAATTCAAATGAAACATTTAAGTATAGGCCTACAGACAAACAAAAATTCAGAAATAAATGATGCGTTACAGATGCAAATTGAAGTCCAAAGAAGACTGCATGAGCAGCTTGAGGTACAGCGGCACTTGCAGCTAAGGATAGAGGCACAAGGGAAGTACCTGCAGGCAGTGTTGGAAAAGGCACAAGAAACACTAGGAAGACAAAATTTAGGTGCTGAGGGAGTTGAAGCTGCCAAAGTTCAATTATCTGAACTGGCATCAAGAGTATCCTCTCAAAGTCTAGACACTAAATTTTCAGAACTGAAAGAATTACCGGTCCTGTGGCCTCATCAAACACAAGAGGGCCAAGCCACTGACTGTTCAATGGGTAGTTTCTTGACCTATAGTGAGGAATCTCAAAGAAACAGAGAAACACATAAAATGAGCCTGAATCTGATAGCCTACAATGGACCTCCATTTTCAGTTTCGAAAGGTTGTGTGGAAGAGTCAGTGCATTTAAAGCCTGGTCTCACATTGAGTGAAGAAGTGAAGGAGAATATGATGTTTCTTTCCTCATCAAGTGATAGTAAAGTGGTGAAGGGAGATTTTTTACAAGAAAGGCCCTCAAGCCTCTTATCCATGAATGTTGGTGTTCTAGAAGAGGAAAAATTTGGGAGAACAACTCTTTCAAAGGAAGAAGGCTGGAAGGTAAGAGACAGCACTGAAACGGAGAGAATGGCTGTTAAATTGAACCATGAGAAGATTTCTACTACAGACTATAGACTTGCAAACTTTGAAGTGAAACTAGATCTGAATTCCCATGATGATAATGATGCTTCTTCCCACTGCCAACAATTTGATTTGAATGGATTCAGCTGGAATTGCTAG	882	0.4059	MSDASGIQMKHLSIGLQTNKNSEINDALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGAEGVEAAKVQLSELASRVSSQSLDTKFSELKELPVLWPHQTQEGQATDCSMGSFLTYSEESQRNRETHKMSLNLIAYNGPPFSVSKGCVEESVHLKPGLTLSEEVKENMMFLSSSSDSKVVKGDFLQERPSSLLSMNVGVLEEEKFGRTTLSKEEGWKVRDSTETERMAVKLNHEKISTTDYRLANFEVKLDLNSHDDNDASSHCQQFDLNGFSWNC*	294

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac4g00949	293	Coils	Coil	25	45	-	-
	Phac4g00949	293	Pfam	MYB-CC type transfactor, LHEQLE motif	23	69	IPR025756	-
	Phac4g00949	293	PANTHER	MYB FAMILY TRANSCRIPTION FACTOR PHL11	18	149	IPR044848	GO:0003700

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac4g00949	Phac-Chr4	14044622	14048050	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac4g00949	3	292	G2-like Transcription Factor Family	AT3G04030	47.099	1.59e-66	209

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac4g00949	-		-	gmx:100786282	496.508