LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac4g00948	ATGTCAGATGCAAGTGGAATTCAAATGAAACATTTAAGTATAGGCCTACAGACAAACAAAAATTCAGAAATAAATGATGCGTTACAGATGCAAATTGAAGTCCAAAGAAGACTGCATGAGCAGCTTGAGCAGGTACAGCGGCACTTGCAGCTAAGGATAGAGGCACAAGGGAAGTACCTGCAGGCAGTGTTGGAAAAGGCACAAGAAACACTAGGAAGACAAAATTTAGGTGCTGAGGGAGTTGAAGCTGCCAAAGTTCAATTATCTGAACTGGCATCAAGAGTATCCTCTCAAAGTCTAGACACTAAATTTTCAGAACTGAAAGAATTACCGGTCCTGTGGCCTCATCAAACACAAGAGGGCCAAGCCACTGACTGTTCAATGGGTAGTTTCTTGACCTATAGTGAGGAATCTCAAAGAAACAGAGAAACACATAAAATGAGCCTGAATCTGATAGCCTACAATGGACCTCCATTTTCAGTTTCGAAAGGTTGTGTGGAAGAGTCAGTGCATTTAAAGCCTGGTCTCACATTGAGTGAAGAAGTGAAGGAGAATATGATGTTTCTTTCCTCATCAAGTGATAGTAAAGTGGTGAAGGGAGATTTTTTACAAGAAAGGCCCTCAAGCCTCTTATCCATGAATGTTGGTGTTCTAGAAGAGGAAAAATTTGGGAGAACAACTCTTTCAAAGGAAGAAGGCTGGAAGGTAAGAGACAGCACTGAAACGGAGAGAATGGCTGTTAAATTGAACCATGAGAAGATTTCTACTACAGACTATAGACTTGCAAACTTTGAAGTGAAACTAGATCTGAATTCCCATGATGATAATGATGCTTCTTCCCACTGCCAACAATTTGATTTGAATGGATTCAGCTGGAATTGCTAG	885	0.4068	MSDASGIQMKHLSIGLQTNKNSEINDALQMQIEVQRRLHEQLEQVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGAEGVEAAKVQLSELASRVSSQSLDTKFSELKELPVLWPHQTQEGQATDCSMGSFLTYSEESQRNRETHKMSLNLIAYNGPPFSVSKGCVEESVHLKPGLTLSEEVKENMMFLSSSSDSKVVKGDFLQERPSSLLSMNVGVLEEEKFGRTTLSKEEGWKVRDSTETERMAVKLNHEKISTTDYRLANFEVKLDLNSHDDNDASSHCQQFDLNGFSWNC*	295

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac4g00948	294	Pfam	MYB-CC type transfactor, LHEQLE motif	23	70	IPR025756	-
	Phac4g00948	294	Coils	Coil	25	45	-	-
	Phac4g00948	294	PANTHER	MYB FAMILY TRANSCRIPTION FACTOR PHL11	18	150	IPR044848	GO:0003700

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac4g00948	Phac-Chr4	14044622	14048050	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac4g00948	3	293	G2-like Transcription Factor Family	AT3G04030	46.939	1.16e-64	204

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac4g00948	-		-	gmx:100786282	503.056