Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00943 ATGGGAACCCCACAATCCAACAACTTGCCACCAGGGTTTAGATTCCACCCTACAGATGAAGAACTCATTCTTCACTACCTAAGGAAAAAGGTGGCCTCTATTCCTTTGGCAGTTTCCATCATTGCAGAGGTTGATATCTACAAGTGTGATCCATGGGAGTTACCAGCTAAGGCCGCGTTTGGGGAGAAAGAGTGGTACTTTTTCAGTCCTAGAGATCGGAAGTACCCAAATGGAGCGAGGCCAAACAGGGCAGCTGCATCAGGGTATTGGAAGGCAACAGGCACTGATAAGAACATAGTTGCATCATTGGCAGGAGGAGTGAGAGAACATTTTGGTGTGAAGAAGGCTTTGGTTTTCTACAAAGGAAGACCCCCAAAGGGTGTCAAGACCAATTGGATCATGCATGAATATCGCCTTGTTGACACCAATAAACCTGTTAGGACCAAAGACACTTCCATGAGATTGGATGACTGGGTTCTATGCCGGATATACAAAAAGTCCAAACACAGTCTATCTTCAATCACAGAGGCAGCACAAACAACTCTTGAGGAACAAATCAAAGACACCCTTTTACCAATCTCCAACACTACAACAACTCTTGTCCCTCCTCCACAGGCCACACTCATGTCCCAAAAATCTCTATCATTCTCTAACCTCTTGGATGCCACAGACTTTTCCATGCTTAGCACCATCTTATCTGAGAACCACTGCTCCAATTACCCAAACACAAATGAACCTTTGTTCAATTGTGAGAATCTGGATCATGAAACCCCCCAAAACTACTACACCAGCAACAATACTATTAATAATGTTCAGAAGAACCCTTCAGTGATTACCCACATGCCCAAACACCACCTTTCAAACATAGATGAGGACATCATGCACCCTTCAAAGCAACACCATAGTTCCTCTTGCAACTTTCCAAACACCACCCTCCAAAATCAGAACCCCCAATGGAACTTCATGTTCAAGCAGCCTCACATGAATCACCAGCTACTTCCGGGTCCTCAATATCTTCAGTTTCAGTGA 1029 0.4451 MGTPQSNNLPPGFRFHPTDEELILHYLRKKVASIPLAVSIIAEVDIYKCDPWELPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKNIVASLAGGVREHFGVKKALVFYKGRPPKGVKTNWIMHEYRLVDTNKPVRTKDTSMRLDDWVLCRIYKKSKHSLSSITEAAQTTLEEQIKDTLLPISNTTTTLVPPPQATLMSQKSLSFSNLLDATDFSMLSTILSENHCSNYPNTNEPLFNCENLDHETPQNYYTSNNTINNVQKNPSVITHMPKHHLSNIDEDIMHPSKQHHSSSCNFPNTTLQNQNPQWNFMFKQPHMNHQLLPGPQYLQFQ* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00943 342 ProSiteProfiles NAC domain profile. 9 166 IPR003441 GO:0003677|GO:0006355
Phac4g00943 342 Gene3D NAC domain 18 171 IPR036093 GO:0003677|GO:0006355
Phac4g00943 342 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 269 - -
Phac4g00943 342 Pfam No apical meristem (NAM) protein 10 139 IPR003441 GO:0003677|GO:0006355
Phac4g00943 342 FunFam NAC transcription factor 56 18 171 - -
Phac4g00943 342 SUPERFAMILY NAC domain 6 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00943 Phac-Chr4 13797975 13801100 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00943 7 234 NAC Transcription Factor Family AT3G04070 63.948 1.80e-100 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac4g00943 NAM 4.3e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00943 - - gmx:100817074 545.814