Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00938 ATGATGGAAGAACCAGTTGTGGTTAACAAAGGAGATGAGCCTTTGGATTTGCCTCCAGGTTTCAGGTTCCACCCCACAGATGAAGAGATCATCACTTGTTACCTCACAGAGAAAGTGCTGGATAGAGGTTTCAGTGCAACTGCTATTGGGGAAGCTGATTTTAACAAGTGCGAACCTTGGGACTTGCCCAAGAAAGCAAAGATGGGGGAGAAAGATTGGTACTTCTTTTGCCAAAGGGATAGGAAGTATCCCACTGGCATGAGAACCAATAGAGCAACACAATCTGGTTATTGGAAGGCCACAGGCAAGGACAAAGAGATTTACAAAGGGAAGAACAATCTTGTGGGGATGAAGAAGACCCTTGTGTTCTATAGAGGAAGAGCTCCAAAGGGAGAGAAGACAAATTGGGTTATGCACGAATTCAGATTGGAAGGCAATTTCGCATGTTACAATCTTCCCAAAGCTGCAAAGGATGAATGGGTTGTGTGCAAGGTTTTCCATAAGAGCAACACTGATGTTAACAAAAGGGTACTCCCCACTAACCCTGGCATTGGCCTTCTTAGAATGAACTCAATTGGAGAAGATCTATTTGATTTCTCTTCACTTCCACCTCTCGTGGATCCTCTCTTTGACCAAACCTCACACAAACACATTGACAATGATTTCAAGGATACTACTAATAGTACTAACACACCTTCATCATCAGCAGCTAAACCACCCTCAGATGGCTATTACCTTCCCTATTTCATGAACAACAATCACCACATGCTGATGATGATGAAGCCTGAAGAACACAGAATCTATGAGACTTCTGCCACCAACATTAACTATGCCTCCACCAGCCAAGGGAATTTCAACTCTAACAACCCAATGGCAATTGGCACAAGCAGTAACTCCCTTCAAAACTCAACATCACCCTTCAATATGTTTCAAGATTATTATATGCACCAAGGCAAAAACAGTTTCCAGCAGTTGAAGATGGAACAATTCTCCAACACTAACCAGCCTGTGGTCAGTGCCTCTCAAGACACGTGCCTGAGCAATGACAGAAACACTGACACTTCCTCGGTGGTGTCAAAGCAAGACAACATGGGAAGGAACAAGGCATTGTACGAGGATCTTGATCAAGCTCCTTCATCAGTTGCTACCCTCTCAGATTTGGATTGCCTCTGGGATGATTACTGA 1185 0.438 MMEEPVVVNKGDEPLDLPPGFRFHPTDEEIITCYLTEKVLDRGFSATAIGEADFNKCEPWDLPKKAKMGEKDWYFFCQRDRKYPTGMRTNRATQSGYWKATGKDKEIYKGKNNLVGMKKTLVFYRGRAPKGEKTNWVMHEFRLEGNFACYNLPKAAKDEWVVCKVFHKSNTDVNKRVLPTNPGIGLLRMNSIGEDLFDFSSLPPLVDPLFDQTSHKHIDNDFKDTTNSTNTPSSSAAKPPSDGYYLPYFMNNNHHMLMMMKPEEHRIYETSATNINYASTSQGNFNSNNPMAIGTSSNSLQNSTSPFNMFQDYYMHQGKNSFQQLKMEQFSNTNQPVVSASQDTCLSNDRNTDTSSVVSKQDNMGRNKALYEDLDQAPSSVATLSDLDCLWDDY* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00938 394 MobiDBLite consensus disorder prediction 341 360 - -
Phac4g00938 394 Pfam No apical meristem (NAM) protein 18 143 IPR003441 GO:0003677|GO:0006355
Phac4g00938 394 ProSiteProfiles NAC domain profile. 17 168 IPR003441 GO:0003677|GO:0006355
Phac4g00938 394 MobiDBLite consensus disorder prediction 224 238 - -
Phac4g00938 394 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 298 - -
Phac4g00938 394 SUPERFAMILY NAC domain 14 168 IPR036093 GO:0003677|GO:0006355
Phac4g00938 394 FunFam NAC domain-containing protein 100-like 26 172 - -
Phac4g00938 394 MobiDBLite consensus disorder prediction 217 238 - -
Phac4g00938 394 Gene3D NAC domain 26 173 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00938 Phac-Chr4 13627586 13629974 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00938 1 392 NAC Transcription Factor Family AT5G18270 48.492 9.50e-116 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac4g00938 NAM 3.9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00938 - - gmx:100813376 608.216