Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00881 ATGAACGAATTCACTTTCCATTCCCTTTCACAAATGTTAGCAGCGGAAGAAAGTGTTCCCCCGAAGCGCTGCAACGCGAGAGAGCCTCCTCTGCTTCAATGCGCAGAGCTTGTGCTACCCTACCTTAACCCTTCAGAACTTGCCAACGTCTCCCTCACCTGCAAACCTATCCTCAAGCTCTCACGCTCCATCACCTTCCGTCGCGCTTCCGACGCTTCCAGAACCTTCGAGACCCTTCCGATTCCATTCCTTAACGCAGTTGATTCCCACCCATACGCGCCCTTCTTCTACACGCGCTCCCTCGTCCTCCCCGCGCCACTCCCCCTCCTGCGCCAGCCCTGGGGCTCGTCGGCAGTTTCCCCCTCCGCTAAGTGTCACCTTCTTCGCGCGGAGTCAGTGGGCTTCGTCGATGGCGCAGGCCGGGCCGTGTCGGGCTGCGAGTGTGAGGCATGTGCGGACGCTGAGTGTCCTTGTGCTGGCCTGGATGGGCTGGATGACGTTGGCAGAGAGTGCGGGCCCGGGTGCCGGTGTGGGCCCGAGTGCGGGAACCGGTTGACACGGAATGGGGTGGCGGTGAGGGTGAAGATTGTTAGGCATAGGAGGAAAGGATGGGGGTTGCATGCGGATCAGTTAATCGCGAAAGGGGAGTTTGTGTTTGAATATGCAGGTGAACTCCTGACAACCAAGGAAGCCCAGAGGAGACATCAATACTATGATGAACTGGCATTGCAGGGCCGTTTCTCTTCAGCTCTTTTAGTTGTGAGGGAACATCTTCCTTCTGGAAAGGCATGTCTGAGATTGAATATCGATGCAACCAGATTAGGAAACATTGCACGATTTGTAAATCATTCATGTGATGGTGGTAATTTAAGCACAAAGCTAGTTAGAAGTTCAGGAGCTTTGTTCCCTCGCCTATGCTTCTTTGCTTCAAAAGATATCCTAGTAGATGAAGAGCTTACTTTTAGCTATGGAGAAATCAGGAAAAGGTCAAAGGGGTTGCCATGCTTTTGCAATAGCCCTTCTTGCGTTGGAACATTGCCCTCTGAAGACACTTGA 1056 0.5322 MNEFTFHSLSQMLAAEESVPPKRCNAREPPLLQCAELVLPYLNPSELANVSLTCKPILKLSRSITFRRASDASRTFETLPIPFLNAVDSHPYAPFFYTRSLVLPAPLPLLRQPWGSSAVSPSAKCHLLRAESVGFVDGAGRAVSGCECEACADAECPCAGLDGLDDVGRECGPGCRCGPECGNRLTRNGVAVRVKIVRHRRKGWGLHADQLIAKGEFVFEYAGELLTTKEAQRRHQYYDELALQGRFSSALLVVREHLPSGKACLRLNIDATRLGNIARFVNHSCDGGNLSTKLVRSSGALFPRLCFFASKDILVDEELTFSYGEIRKRSKGLPCFCNSPSCVGTLPSEDT* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00881 351 SMART set_7 192 330 IPR001214 GO:0005515
Phac4g00881 351 Pfam SET domain 203 324 IPR001214 GO:0005515
Phac4g00881 351 ProSiteProfiles Post-SET domain profile. 331 347 IPR003616 -
Phac4g00881 351 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 69 340 - -
Phac4g00881 351 SUPERFAMILY SET domain 79 344 IPR046341 -
Phac4g00881 351 ProSiteProfiles SET domain profile. 192 324 IPR001214 GO:0005515
Phac4g00881 351 Gene3D SET domain 55 333 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00881 Phac-Chr4 12160731 12168723 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00881 170 346 C2H2 Transcription Factor Family AT2G23740 33.155 4.49e-24 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phac4g00881 SET 6.3e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00881 K11433 - gmx:100786871 544.273