Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00880 ATGGGAAATAGGCTTCATCTTTCGGTGCTTCTGGTTTTGGTAACAGTTCTACTTTCAGTCATGCACTCGGAGCAACTGCAATCCTCTCTCTCTCAGACCCTCCTAAGAATTCAACAGCTATTGAACTTTCCAACTGTTTTAAGCTGCTGGGACAACAACACAGACTTTTGCAGCACAGATTCAACATCTTCTCTCACTGTTGTTTGCTATGATGGCACCATAACCCAGCTGCACATAGTTGGTGAAACAAGAGCTCTACTTCCTAAAAATTTCTCAATAAATTCCTTTTTCACAACACTGGTTAGGCTTCCCAGTCTCAAAGTCCTCACTTTGGTTTCTCTTGGCATATGGGGTCCATTGCCTGGTAAGATTGCTCATTTGTCATCACTGGAAATTTTCAATGCGAGTTCAAATTTCCTATATGGTTCCATCCCTTCAGAGTTCTCATCACTGTCACATCTCCAAACACTCATTCTAGACGACAACATGTTTTCTGGCCATCTTCCTGAATGGATTGATTCCTTTCCAGCCTTAACTGTGTTATGTTTGAAAAACAACTTGTTCAATGGTTCACTTCCGGATTCCCTCAGTAGCTTGGAGAATATGAGAATTCTTTCACTTTCTCATAACCACTTTTATGGACCAGTGCCTGATTTGCGCCGTTTGACAAATCTCCAAGTGCTGGAATTGGATGATAATGCTTTTGGACCCCGGTTTCCCCAGCTTGGTGACAAACTGGTTACTCTAGTACTAAGAAACAATAAGTTCAGGTCTAGCATCCCTGATGAAATGAGCTCATGTTATCAACTTCAGACACTTGATATCTCAGCAAACACATTTGTTGGACCATTCCAACTACCACTAATGTCACTTCCTTCTATTACTTATCTGAATATTTCTGGCAACAAATTAACAGGAATGCTTTTGGAGAATCTGTCTTGCAATCCTGGACTTGAAGCAGTGGATTTATCCTCAAATCTTTTGACTGGGATCTTACCAAAATGTTTAATCTCAAATGCCAATGATAAGACTTTCTTGTATGCTAGAAATTGTCTAGAAGAGACAAATCAAAATCAGCACGCACTACCCTTTTGCCACACTGAAGCCATAGCTGTGGGAGTAGTACCTGAGGGAAAGAAGGACAAACGAGTATCCAAGGCAGTTCTCTCCCTTGGGATAGTTTGTGGTATTTTTGGAGGAGTGGCAATTGTTGCACTGCTTTTTTTCATTATCAGAAGGGGAAATGTCCAAAGAAAAATCAAGAATCCTCCATCAAAATTAATATCAGAAAATGCTGCTTCAGGATACACCTCTAAGTTACTCTCTGATTCAAGGTATATATCTCAAACAATGAAGTTTGGAACAGTTGATCTGCCTCCTTATCGAGCTTTCTCACTGGATGAGATTGTAGCAGCTACAAACAACTTTGACTCGGCTTGTTTTATGGGTGAAGTTTCTCAGGGAAAGATGCACAGAGGTCAACTAAAGGGTGGTTTACTTGTTGCCATTAGAAGTGTAAAAGTCACCAAAATCTACAGCACTCAAGATTTTATGCATAACATGGAGCAGATATTCAAATACAGGCATCGTCATTTAGTCAGTGTTCTTGGACATTGCTTTGAATGTTATTTGGATGATTCAAGTGTCAGCAGCATATTTATTGTCTTTGAGTATGTACCAAATGGCACACTCAAGAGCTGGATCTCAGATAGGCACTACAGAAAATCCCTGACATGGATGCAACGCATAGAAGCTGCTATTGGAGTAGCAAAGGGCATCCATTATTTGCATACAGGAATTGTACCTGGTGTATATTCAAACAATCTCAAAATCACAGATGTTTTACTTGACAAAAATTTTGTTGCAAAAATCAAAATTTATGACTCGCCTTTGTATTCTTCTCCCATGAGGAAGGTTGGGCAAGGTAATCCTTCTAGAGAATTCAAAAGTCCTAGCGCTAACAAAAATGTAATACAGGAAGACAAGTCTGATGTATATGACTTTGGAGTAATCCTGCTGGAACTCATTCTAGGAAGGACAATAAAGTCAAGGAATGTGGACACTTTAAAAGATCTGTTGCAAGCAAGCATAACAGCTGATGGTGAAGCTAGGAGGAGCATCATAGATCCAGCAGTTCGCAAGGTGTGCTTAGATCAATCATTGAAGACAATGATGGAAATTTGTGTGAGGTGCCTAGTCAAAGAGCCAGCAGAGAGACCCTCTATTGAGGATGTTTTGTGGAATCTGCAGTTTGCAGCTCAAGTCCAAGATGCATGGATCGGAGACTCTCAAAGTGGTAGTGATGGCTCACCTATCTCACCTTTGGCATCTATACGAATGACCTTCCATTAG 2352 0.4043 MGNRLHLSVLLVLVTVLLSVMHSEQLQSSLSQTLLRIQQLLNFPTVLSCWDNNTDFCSTDSTSSLTVVCYDGTITQLHIVGETRALLPKNFSINSFFTTLVRLPSLKVLTLVSLGIWGPLPGKIAHLSSLEIFNASSNFLYGSIPSEFSSLSHLQTLILDDNMFSGHLPEWIDSFPALTVLCLKNNLFNGSLPDSLSSLENMRILSLSHNHFYGPVPDLRRLTNLQVLELDDNAFGPRFPQLGDKLVTLVLRNNKFRSSIPDEMSSCYQLQTLDISANTFVGPFQLPLMSLPSITYLNISGNKLTGMLLENLSCNPGLEAVDLSSNLLTGILPKCLISNANDKTFLYARNCLEETNQNQHALPFCHTEAIAVGVVPEGKKDKRVSKAVLSLGIVCGIFGGVAIVALLFFIIRRGNVQRKIKNPPSKLISENAASGYTSKLLSDSRYISQTMKFGTVDLPPYRAFSLDEIVAATNNFDSACFMGEVSQGKMHRGQLKGGLLVAIRSVKVTKIYSTQDFMHNMEQIFKYRHRHLVSVLGHCFECYLDDSSVSSIFIVFEYVPNGTLKSWISDRHYRKSLTWMQRIEAAIGVAKGIHYLHTGIVPGVYSNNLKITDVLLDKNFVAKIKIYDSPLYSSPMRKVGQGNPSREFKSPSANKNVIQEDKSDVYDFGVILLELILGRTIKSRNVDTLKDLLQASITADGEARRSIIDPAVRKVCLDQSLKTMMEICVRCLVKEPAERPSIEDVLWNLQFAAQVQDAWIGDSQSGSDGSPISPLASIRMTFH* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00880 783 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 244 - -
Phac4g00880 783 ProSiteProfiles Protein kinase domain profile. 476 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00880 783 Gene3D Ribonuclease Inhibitor 28 244 IPR032675 -
Phac4g00880 783 SUPERFAMILY Protein kinase-like (PK-like) 456 751 IPR011009 -
Phac4g00880 783 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 559 765 - -
Phac4g00880 783 PANTHER UNNAMED PRODUCT 94 679 - -
Phac4g00880 783 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 449 558 - -
Phac4g00880 783 Gene3D Ribonuclease Inhibitor 245 359 IPR032675 -
Phac4g00880 783 SUPERFAMILY L domain-like 100 352 - -
Phac4g00880 783 Gene3D Transferase(Phosphotransferase) domain 1 559 764 - -
Phac4g00880 783 Pfam Protein tyrosine and serine/threonine kinase 482 746 IPR001245 GO:0004672|GO:0006468
Phac4g00880 783 Gene3D Phosphorylase Kinase; domain 1 438 558 - -
Phac4g00880 783 Pfam Leucine rich repeat 152 212 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00880 Phac-Chr4 12093936 12104290 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00880 43 777 Miscellaneous Gene Families AT3G03770 60.594 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Phac4g00880 PK_Tyr_Ser-Thr 1.2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00880 - - gmx:100813207 1306.97