Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00879 ATGTCAGAGCCACATGATCTTAATACTAATGGTGGCGATCACAATGCTGGATCAGGAAGCAGACGCAGAGGTCCTAGTTTCAGACGTACCATGGCGACACAAACACAAGATGAACCAATGCTAGGATCTTCGCCTGCAACACCATGTGGGGCTTGCAAGTTCTTGAGGAGGAAGTGCATTGGAGGCTGTATCTTTGCACCCCACTTTGGCACTGACCAAGGTGCAGCCAAGTTTGCAGCTGTGCACAAGGTGTTTGGGGCTAGCAATGTGTCAAAGCTCTTGTCCAACATTCCGGCCAACCGCCGCCATGAAGCGGCTACAACCATATCCTATGAGGCTCAGGCAAGGCTGTCTGATCCGGTTTACGGTTGTGTCTCCACCATCCTTTCTCTCCAACAACAGGTAGCATCTATGCAAGCAGAGCTAGCTATGGTGCAAACTCAGTTGATGAATAGTAGATTTGCCTATGCAAGTGCTCTTGAGACCACACAAGTGCAGCAACCAAACATGAATGCAGCAGCACTACAACCAGCATATTCCAACAACTCATGTGCTTCCACCAACCTTATGAACTTGAGCAGCTTCAACAATAACCCTGCTGGCTTTGACCTTGCAATGCACACAGCACCCTCATCAAGCACTTTAGAGCCTCTTCAACTAACAAGGCTGTCCAAATGTGAAGAAGATGAAGAAGAAGAAGAAAGCAGGACCCAGCCAGGCTTCAGCCACCATTAA 735 0.4871 MSEPHDLNTNGGDHNAGSGSRRRGPSFRRTMATQTQDEPMLGSSPATPCGACKFLRRKCIGGCIFAPHFGTDQGAAKFAAVHKVFGASNVSKLLSNIPANRRHEAATTISYEAQARLSDPVYGCVSTILSLQQQVASMQAELAMVQTQLMNSRFAYASALETTQVQQPNMNAAALQPAYSNNSCASTNLMNLSSFNNNPAGFDLAMHTAPSSSTLEPLQLTRLSKCEEDEEEEESRTQPGFSHH* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00879 244 MobiDBLite consensus disorder prediction 1 26 - -
Phac4g00879 244 MobiDBLite consensus disorder prediction 1 16 - -
Phac4g00879 244 MobiDBLite consensus disorder prediction 224 244 - -
Phac4g00879 244 Coils Coil 128 148 - -
Phac4g00879 244 PANTHER LOB DOMAIN CONTAINING PROTEIN 46 230 - -
Phac4g00879 244 ProSiteProfiles LOB domain profile. 47 149 IPR004883 -
Phac4g00879 244 Pfam Lateral organ boundaries (LOB) domain 48 146 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00879 Phac-Chr4 12068095 12071500 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00879 47 232 AS2 family AT3G03760 60.914 2.41e-70 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac4g00879 LOB 1.7e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00879 - - gmx:100813769 367.081