Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00875 ATGGATCCCTCTCGCCGCGCCCCACGCGCCGTGATCGACCCCGTACCCAAGTTCCGCCAAGTCGGGTTCTTCGCCCCGCCCGAACGCTCCCAATCGGGTCCTCCCAACTCGACCCACACCTCGCCCCCAGTCTCCAACTCCCTTTCGCCTGTCATGATCCCGCCGCCGCGCCACCTCTCCGACAACCTCCTCCTCCACGCGCCCCCCGCCGCATCTCCCCTTCGGCCAGACTCCGGCGGCGGCGGAACCTCCTTCGATACCGTGGACTTCTTCCCCGCGCCGCTTTCGCCCGCTCTGCCGTCTTCGTCGTACTCAAGCAGGATCGCCGGAGACTTCTACAAGGGAAACGGTGGGAAGGTGGCAGCGTCGTCTTTCCCCCGCGGAGGATTCGACCTGACGGCGATGAAGGCGGCAGCGGCCGCGAGCGTCGTCGTGCCGGCGAGCGAGCTGACAACAGTTTCGGTGGTGAATGATTCGCTAGTGGTTCCCGAAAAAGAAAAAGGAAGCAGAGGAGGAGGGTCAGCAGTGGAAGTGAAAGAGCAACCTGCTAGTCTAAAACAGAAACCAAAATCCTCAAAAGCTGAAAGACGTGCACTTCAAGAAGCTCAAAGAGCTGCAAAGGCTGCAGCAAAAGCTGAAGGAAATAAAGCATCTGGAACTGCAGCTTCAGCGAATGCCAAACCGGCTAAAGCTGCAAAGCCTGCTCAGAAAATTGATAATGCACCTGTTGCAGCATCCGAAAAGAAGGGAGGTGAGATTCCACCAGAAAAGGATAGAAAAAAAGATGCTCCTCAACCACGCATGCAGTATGATGACAAGAGCCGAGTGGAGAAAGCTAAGCGTCGCGCAGTGGTGAAACAAACTGAAGCTAGGAACAGAGTTGAGTTGTTCAGGCATTTGCCACAATATGAACATGGGAGTCAGCTTCCAGATCTCGAGGCAAGGTTTTTCCATCTTTCTCCAGTGCACCCTGCTGTTTATAAGGTGGGTTTGCAGTACCTAACTGGAGATATATCTGGTGCCAATGCTCGGTGTATTGCAATGCTACAAGCATTTCAGGAGGCCATCAAAGACTACAAGGTTCCACGAGAGAAGACTCTTGTGAGAGACTTAACAGCAAAAATTAGTAGTTATGTATCATTTCTTATTGAGTGTCGACCTCTGTCAATCAGCATGGGAAATGCAATTAGGTTTCTCAAAAGTCGGATAGCCAAGCTACCTTTGACCTTGTCTGAATCAGAAGCAAAAGCTTCTCTCCAGTCAGATATTGAGCGTTTTATTAGTGAGAAGATTATACTCGCCAACAAGGTGATAGTGAAGCATGCTGTCACTAAAATAAGAGATGGTGATGTTCTTCTAACTTACGGATCCTCGTCAGCTGTTGAAATGATACTATTACATGCACATGAGTTGGGAAGACAGTTTCGCGTTGTGGTAGTTGACTCTTCTCCGAAGCTTAGAGGGAAACTTTTGCTTCGCAGATTGGTGGAGAAAGGTCTTAGCTGTACATACACTCATATAAATGCTGTTTCCTATATAATGCATGAAGTTACTCGAGTATTTCTGGGTGCTTCATCAGTTTTATCTAATGGAACAGTATATTCAAGAGTAGGGACTGCATGTGTTGCTATGGTTGCTCATGCATTCCGTGTACCTGTCATAGTATGTTGTGAGGCCTATAAATTTCATGAACGGGTACAGCTGGACTCAATATGCTCTAATGAACTTGGTGATCCGGATGTAATTTCAAATGTACTGGGTAGAGAGGATGTCAACCACTTGGATGGCTGGGCCAATATTGAAAATCTGCAACTCTTAAATCTGATTTATGATGCAACACCTTCAGATTATGTTTCAATGATTGTCACAGATTATGGCATGGTTCCCCCTACAAGTGTGCCAGTAATTGTAAGAGAATACGGGAGAGAACAGATCTGGATATAA 1944 0.4861 MDPSRRAPRAVIDPVPKFRQVGFFAPPERSQSGPPNSTHTSPPVSNSLSPVMIPPPRHLSDNLLLHAPPAASPLRPDSGGGGTSFDTVDFFPAPLSPALPSSSYSSRIAGDFYKGNGGKVAASSFPRGGFDLTAMKAAAAASVVVPASELTTVSVVNDSLVVPEKEKGSRGGGSAVEVKEQPASLKQKPKSSKAERRALQEAQRAAKAAAKAEGNKASGTAASANAKPAKAAKPAQKIDNAPVAASEKKGGEIPPEKDRKKDAPQPRMQYDDKSRVEKAKRRAVVKQTEARNRVELFRHLPQYEHGSQLPDLEARFFHLSPVHPAVYKVGLQYLTGDISGANARCIAMLQAFQEAIKDYKVPREKTLVRDLTAKISSYVSFLIECRPLSISMGNAIRFLKSRIAKLPLTLSESEAKASLQSDIERFISEKIILANKVIVKHAVTKIRDGDVLLTYGSSSAVEMILLHAHELGRQFRVVVVDSSPKLRGKLLLRRLVEKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDPDVISNVLGREDVNHLDGWANIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIVREYGREQIWI* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00875 647 MobiDBLite consensus disorder prediction 155 285 - -
Phac4g00875 647 Pfam Initiation factor 2 subunit family 338 630 IPR000649 GO:0044237
Phac4g00875 647 MobiDBLite consensus disorder prediction 250 285 - -
Phac4g00875 647 MobiDBLite consensus disorder prediction 1 86 - -
Phac4g00875 647 MobiDBLite consensus disorder prediction 30 47 - -
Phac4g00875 647 SUPERFAMILY NagB/RpiA/CoA transferase-like 321 640 IPR037171 -
Phac4g00875 647 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 39 644 - -
Phac4g00875 647 MobiDBLite consensus disorder prediction 183 202 - -
Phac4g00875 647 Gene3D - 433 640 IPR042529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00875 Phac-Chr4 12009930 12015736 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00875 4 647 Eukaryotic Initiation Factors Gene Family AT5G38640 66.069 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00875 K03680 - gmx:100775998 1043.11