Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00874 ATGTTCCCTTACAGTTCCAACCCCTACCCTTCTTTCCCTTCATCATCTTCTTCATTCCATCCTTTTCCATTCCTCAACCTTGAGAATGCTTCTGCAAGCAACACCCTTCTTCATGATCCACTTTCTGTGCCTTACTTACCAACTCATCACAACCCTCCAAACATCCAAGAAGCACTGAGCAATTTGCCAGTCACAGATCACAACTGTGGTGGTGGAGGTTCTGCAATGACCAAACCTGACCCAAATGGTGGTGGTGGTGCTCCTCACTATGGCCTTTCTTGCTTCCTCACAAAGAAGCCAGCTAAGAAAGACAGACACAGCAAGATTTACACCTCTCAGGGTTTGAGGGACCGGAGGGTGAGGTTATCCATTGAGATTGCTCGCAAGTTCTTTGATCTTCAAGACATGCTAGGGTTTGACAAAGCCAGCAACACCCTTGAGTGGCTCTTCAACAAGTCCAAGAGAGCAATTAAGGAGCTGGCAAGGAGCAAGAACAGCACCAACAGTGAAGAAGGAGCCAAGAGCTTCTCTTCTTCATCTGAGTGTGATGATGACTGTGAAGTGATTTCCGAGATCAGGCAGAAACAACAACTCATCACTGGTGATGCTGCTACTCCACACAACCTACAACATGGGTTAGATTCAAGCGATAATAAGTCACCGACATCACTGGCTGCAAGGGAGAAGATGAAGTTGAAAAGGACACAGAAGGAACCTGCAAAGATGAAGGAGTCAAGGGAGAAAGCAAGAGCAAGAGCAAGGGAAAGGACTAGTAACAAGATTATGTGCAATGTTAATTCCAACACAGGGAGGGTGCAACAAGACTTGAAGAAAAAGTACCCTGCAATTGAAAATAACCACTCTCAATTCATGCATCAATCAAGGTCACCCACTCACCCTCATCACCTTGTGGGAAGTGAAGCACCTAGAGATGACTTCAACGTTATTGAGGAATCCATAGTGATCAAGAGAAAGTTGAAGCCATCATTGATGTCCTATTCTCATCACCATCACCAAAATCTTATGATCCCTAAGGAACCACCATGTTTCAACAACAACAGTGAGTACCACCCCTTCTCCAATTTATCTCCAAATTGGGATGCTAATGGATCCACTGGCCGCTCCAACTTCTGTGCCATAGCTAGCATGAATCCATCCACAGGGCTTCAAATCTTTGGAAAGTCTTGGGAGGAGTGCACCAATCCACGTTTACACTAG 1218 0.4548 MFPYSSNPYPSFPSSSSSFHPFPFLNLENASASNTLLHDPLSVPYLPTHHNPPNIQEALSNLPVTDHNCGGGGSAMTKPDPNGGGGAPHYGLSCFLTKKPAKKDRHSKIYTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKRAIKELARSKNSTNSEEGAKSFSSSSECDDDCEVISEIRQKQQLITGDAATPHNLQHGLDSSDNKSPTSLAAREKMKLKRTQKEPAKMKESREKARARARERTSNKIMCNVNSNTGRVQQDLKKKYPAIENNHSQFMHQSRSPTHPHHLVGSEAPRDDFNVIEESIVIKRKLKPSLMSYSHHHHQNLMIPKEPPCFNNNSEYHPFSNLSPNWDANGSTGRSNFCAIASMNPSTGLQIFGKSWEECTNPRLH* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00874 405 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 82 354 IPR005333 GO:0003700
Phac4g00874 405 ProSiteProfiles R domain profile. 243 260 IPR017888 -
Phac4g00874 405 ProSiteProfiles TCP domain profile. 102 160 IPR017887 -
Phac4g00874 405 MobiDBLite consensus disorder prediction 229 256 - -
Phac4g00874 405 MobiDBLite consensus disorder prediction 161 181 - -
Phac4g00874 405 Pfam TCP family transcription factor 101 261 IPR017887 -
Phac4g00874 405 MobiDBLite consensus disorder prediction 291 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00874 Phac-Chr4 11925607 11927705 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00874 97 369 TCP Transcription Factor Family AT1G67260 33.094 1.14e-31 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phac4g00874 TCP 8.3e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00874 - - gmx:100801549 631.713