Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00754 ATGGTGAGCACCCAAAATGATATAGCAAAACACATTGAGATAAACACTCTTTGTAGAAGGTTGTTATTGCTCTGCCAAGGTAAAAAAGTGATGGAGGAAATGAAGGAGAAGAACTGGAGAATGGAAGTGGAGGAGAATCTGCAGAGGCTGCAATCTCTTCTGTTGGGCACCGAACAAGCTCTGGCAAGCCAGGACTTCTCCTCCGCTTACGTCCTCGCGCTTCGTCTTCTCGGATTCCTCGACGCCAAATCCCACTCTGGCGTCGTCGACGAAGCCTTCCTCCAACCGATTCGCCGCGACGCACTCGCCAAGCTCCACATCGCTCGCAGATCCCTCACTCCTCAATCTGATCGCCAAGCTTTTGAGCAAGCAAAGAAATCTCCAGGATGCATATTTGGCACAACAGGAGATATTGACATTGAGAAGATTCGGAATTCAAAGTACTTCCGTGCACTTGTCAACCAATCTAAAGAAACATATGAGAATAAATTGGTTGATCACCTGGGGAAACAGGACAAAGCAGGCAGCAAAGCCTCGAAGCAAATGGTGCAAACGAAGTTGCTATCCATGTATGTGAAAAACAGCTTGAGGACCAGCAATTGTTCCAAGAGTTCTCTGAACATGAAAAATAATAGCTCCGAGGACTGCAGGATTCTTGGTGGGCCTCAATCTCAAGCCAGCCATACAAAGGGTCCTGGTATCTCTTCTATCTTGCAAGTTGAAGGAGACGAAAGAGCTTTTGGTAACACATTCTCCACTAAACGTGTACACGTGGAAAATAATAGCCTTAGAGTTGGATACTTGAAGTCACCTTCAAGTAAGGAGGAAGTTCACCCTGATGTTTGTGGCAACGGATTTGTTACTGCTAGAGCAAAATTGGAAATGGAAGCAAAGCAGAAGCGAGGAGTAGGTGGTTCACCCTGTGCCTCGGTCTCACCGCAGTGTGATAACAATCCTGCCAACAGGTTGCATGGTGGGAGATCATATGGTGTTTCACGACGTGGCTTCCGTGGTAATTTTGTCCCCCCTATAAAATCCAATGGGAACAATGCTGGAAATATGAGCGCACGAAATGCTGGAAAATATGATGATTCTTTAGATGACTCTACGAAGAAATGTTTGGAAATCCTGTGTGGTCCTGATGGCGAGCTTCCTGAGAAATTGAGGAATTTGGAACCTCGCCTCATTGAACATGTTAGTAACGAGATCATGGATAAAGATCCCAATGTCCGGTGGGATGATATTGCTGGATTGGAGCATGCCAAGAAATGTATTGATGAGATGGTAATATATCCTCTACAACGTCCTGACATATTCATGGGCTGTCGTTCCCCTGGGAGGGGTCTGCTTTTGTTTGGTCCACCAGGAACGGGTAAAACAATGATAGGAAAAGCCATAGCAGGGGAGGCGAAGGCAACCTTCTTTTACATATCTGCAAGTTCGTTGACTAGCAAGTGGATCGGTGAAGGTGAAAAGCTAGTAAGAGCCCTTTTTGGAGTTGCCAGTTGCCGTCAGCCTGCAGTAATTTTTGTTGATGAAATAGATTCTCTCCTGTCTCAGCGTAAATCAGACGGGGAACATGAATCCAGTAGACGGCTAAAGACACAGTTTCTCATTGAAATGGAAGGCTTTGACAGTGGTAGCGAGCAAATTCTGCTTATAGGGGCAACGAATCGTCCCCAAGAGCTTGATGAAGCGGCACGAAGGAGACTTACTAAAAGACTTTATATTCCCCTACCATCCTCAGAGGCAAGAGCTTGGATTGTACGTAACCTTCTACAGAAAGATGGACTATTCAAGCTTTCAAACGAGGAAATGGATATTATATGCAACTTAACGGAAGGTTATTCAGGATCAGACATGAAAAACTTAGTGAAGGATGCTTCTATGGGACCCCTAAGAGAGGCTTTAAAACAAGGCATAGAAATTACGAAGTTAAAAAAGGAGGATATGCGAACAGTAACTCTTCAGGACTTCGAGAACGCCCTCAGAGAGGTGAGGCCTTCTGTTTCCCCAAATGAACTTGGCACGTATGATCAATGGAACAAGCAATTCGGAAGCTTATCATTGTAG 2073 0.452 MVSTQNDIAKHIEINTLCRRLLLLCQGKKVMEEMKEKNWRMEVEENLQRLQSLLLGTEQALASQDFSSAYVLALRLLGFLDAKSHSGVVDEAFLQPIRRDALAKLHIARRSLTPQSDRQAFEQAKKSPGCIFGTTGDIDIEKIRNSKYFRALVNQSKETYENKLVDHLGKQDKAGSKASKQMVQTKLLSMYVKNSLRTSNCSKSSLNMKNNSSEDCRILGGPQSQASHTKGPGISSILQVEGDERAFGNTFSTKRVHVENNSLRVGYLKSPSSKEEVHPDVCGNGFVTARAKLEMEAKQKRGVGGSPCASVSPQCDNNPANRLHGGRSYGVSRRGFRGNFVPPIKSNGNNAGNMSARNAGKYDDSLDDSTKKCLEILCGPDGELPEKLRNLEPRLIEHVSNEIMDKDPNVRWDDIAGLEHAKKCIDEMVIYPLQRPDIFMGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSDGEHESSRRLKTQFLIEMEGFDSGSEQILLIGATNRPQELDEAARRRLTKRLYIPLPSSEARAWIVRNLLQKDGLFKLSNEEMDIICNLTEGYSGSDMKNLVKDASMGPLREALKQGIEITKLKKEDMRTVTLQDFENALREVRPSVSPNELGTYDQWNKQFGSLSL* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00754 690 Gene3D - 580 666 - -
Phac4g00754 690 MobiDBLite consensus disorder prediction 201 234 - -
Phac4g00754 690 Gene3D - 408 682 IPR027417 -
Phac4g00754 690 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 408 685 IPR027417 -
Phac4g00754 690 ProSitePatterns AAA-protein family signature. 551 570 IPR003960 GO:0005524|GO:0016887
Phac4g00754 690 Coils Coil 40 60 - -
Phac4g00754 690 Pfam Vps4 C terminal oligomerisation domain 652 686 IPR015415 -
Phac4g00754 690 FunFam Fidgetin like 1 580 666 - -
Phac4g00754 690 PANTHER AAA DOMAIN-CONTAINING 215 687 - -
Phac4g00754 690 SMART AAA_5 445 581 IPR003593 GO:0016887
Phac4g00754 690 FunFam Fidgetin-like 1 408 590 - -
Phac4g00754 690 MobiDBLite consensus disorder prediction 302 323 - -
Phac4g00754 690 Pfam ATPase family associated with various cellular activities (AAA) 449 579 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00754 Phac-Chr4 9309553 9316530 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00754 386 688 Calmodulin-binding Proteins AT3G56690 31.494 1.56e-40 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00754 K22766 - gmx:100789161 1149.04