Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00746 ATGGAGATGAGCAGCATTTGGATGAGGCATGGAAACAAATATTCTTATATGACCATTATAGGGAAAGGCAGACAGAAGTACCCTACCAAAATTGCAAACCAGCCGTCTTCCCTTTGTTGCTCTCTTCACCTCACCATTCAAGGAGGGAATTCCTTTTCCTATTTCAACATGGATAACCAATTGTTTTCTACCCAGAATAAGAACTTCGAGGAGGGGTTGGCCAGTGGCGATTCAAATTCTTGTCCCGTTCAAATAGGGACAAATGGGAAATCTTGCCACCAATGCCGGCAAAAGAAAGAGGATTTTGCTGCAACATGCAAGAACTTGAAGAAAGGGAAGCCTTGTCCGATTAAGTACTGCCACAAGTGCCTCTTGACTAGGTATGGGGAGAATGCTGAAGAAGTGGCACATTTGGCTGATTGGACATGTCCGAAGTGTCGAGGGTTTTGCAACTGCAGCTTATGCCAGAAAAAACGAGGTGAGCAACCTACTGGTCCCCTATATCGCAATGCCAAAGAATCTGGTTTTAAGTCTGTGGCGGAAATGCTTGCCGTTAAGAAGACTATAGAAGCTTCAGGATTAAATAAGGAGCTTGAAGTACATCTCTCGGGGGAATTTGGGAAACAAAATTGTACAGATACAAATGATACTAAAGTTTGCAACAAAGAGTATGATGGAGGTGATAATGTTGGTGCCATGATCCAAGGAGAGAGCAAAATAATTGAGGAGGAAATTCTTTTGCCCCCTGGAACAGAGTTAAAAGAAATACTTGGTATTGAGTTACCACTCAAAGAAGTTGGGAATGCATTGCAACTCTTAGAGTTTTGCAAAGTATTCGGAAAGGCTCTTGATCTCAAGGAAGGAGGAGCTGAAGCCATGCTAGAAGAATTAGTATGTAAACAAAGCATGCATGCACAAAACAACTTACTGGTTGAATTTCATATTAGAGTGTTGGATTTGATCCTAAACAATTCGGGAAATGAGTCTCCTAGGGATGAAAATAATTCATGGTTGAAACATCTGGAGGATTTAATCATGAAATCGTATCATATACTAAATGATTTTCCTTTGGATTGGCTTCAAGAAGGCATCAGTGGATATTATAAGTTGGATTTGTCTCAAAAGTTTAAACTGATGACTTTTCTCTGTGACGAAGCTCTGAATACTGAGAAATTGAGGAGCTATATTCATGAGGAAAATTCAAGACATGAAAAAGAAGTGAAAGAAGCAAAACACAAGGTTGCTGCAACCAAGGAAAAGGTAAAGTGTCTTCAGAAGAAGTTGCGGAGTGAGAAAGCCAAAGTTGTTCCTTCAACTGTGTCTCCCTATCCGATGGAGGAGCATGAGACTCTTCTTTCGAAAATAAGAATTGAGGTTGATGAAGCACACACTGAGATGCTTGGATTAAAGGGCACAACTCGAAAAGCGAAACTAGGTTGTGATGCTTTGAGGATCAAACCTGAATTTGTGGACAATAATGGTAAAGCATTCTGGAATTTTAGAAGTTGCAGTAGTGAATGTACTGTTTTTTTGCAAGGTAACACTTAA 1548 0.4025 MEMSSIWMRHGNKYSYMTIIGKGRQKYPTKIANQPSSLCCSLHLTIQGGNSFSYFNMDNQLFSTQNKNFEEGLASGDSNSCPVQIGTNGKSCHQCRQKKEDFAATCKNLKKGKPCPIKYCHKCLLTRYGENAEEVAHLADWTCPKCRGFCNCSLCQKKRGEQPTGPLYRNAKESGFKSVAEMLAVKKTIEASGLNKELEVHLSGEFGKQNCTDTNDTKVCNKEYDGGDNVGAMIQGESKIIEEEILLPPGTELKEILGIELPLKEVGNALQLLEFCKVFGKALDLKEGGAEAMLEELVCKQSMHAQNNLLVEFHIRVLDLILNNSGNESPRDENNSWLKHLEDLIMKSYHILNDFPLDWLQEGISGYYKLDLSQKFKLMTFLCDEALNTEKLRSYIHEENSRHEKEVKEAKHKVAATKEKVKCLQKKLRSEKAKVVPSTVSPYPMEEHETLLSKIRIEVDEAHTEMLGLKGTTRKAKLGCDALRIKPEFVDNNGKAFWNFRSCSSECTVFLQGNT* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00746 515 Coils Coil 445 465 - -
Phac4g00746 515 Pfam DDT domain 265 323 IPR018501 -
Phac4g00746 515 Coils Coil 400 434 - -
Phac4g00746 515 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 366 396 IPR028942 -
Phac4g00746 515 ProSiteProfiles DDT domain profile. 263 327 IPR018501 -
Phac4g00746 515 SMART testlast3 263 327 IPR018501 -
Phac4g00746 515 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 87 183 IPR018866 -
Phac4g00746 515 PANTHER OS05G0300700 PROTEIN 87 456 IPR040221 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00746 Phac-Chr4 9229082 9240249 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Phac4g00746 zf-4CXXC_R1 4.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00746 - - pvu:PHAVU_004G063200g 714.531