Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00741 ATGTGTGGTGGAGCTACTGTCTTCTCCGGTCACCAGTTCTTCGGTCTTCCTCATACAACTCATCCCTACCCACCGATCAACTCGGTCACTGCCTGCTTCTTCATCTCGGATTCTGCCAATTGCTGGTGCCAATCGCTTCAGCTTGGTTTCAATGCTACAGTTTTCGGGCCGCATATTTTAATCTTCTCCATGGATTTGAATGCATGCTTCACATATTCAGATGCTCAAAGCTTGAGGGAAAAATGTGCAACCCCAATTCTTAAGCAGGTGAAGAGTGATTTTACCAGATATTGGTATGGAGATGAGCAGCATTTGGATGAGGCATGGAAACAAATATTCTTATATGACCATTGCCGGCAAAAGAAAGAGGATTTTGCTGCAACATGCAAGAACTTGAAGAAAGGGAAGCCTTGTCCGATTAAGTACTGCCACAAGTGCCTCTTGACTAGGTATGGGGAGAATGCTGAAGAAGTGGCACATTTGGCTGATTGGACATGTCCGAAGTGTCGAGGGTTTTGCAACTGCAGCTTATGCCAGAAAAAACGAGGTGAGCAACCTACTGGTCCCCTATATCGCAATGCCAAAGAATCTGGTTTTAAGTCTGTGGCGGAAATGCTTGCCGTTAAGAAGACTATAGAAGCTTCAGGATTAAATAAGGAGCTTGAAGTACATCTCTCGGGGGAATTTGGGAAACAAAATTGTACAGATACAAATGATACTAAAGTTTGCAACAAAGAGTATGATGGAGGTGATAATGTTGGTGCCATGATCCAAGGAGAGAGCAAAATAATTGAGGAGGAAATTCTTTTGCCCCCTGGAACAGAGTTAAAAGAAATACTTGGTATTGAGTTACCACTCAAAGAAGTTGGGAATGCATTGCAACTCTTAGAGTTTTGCAAAGTATTCGGAAAGGCTCTTGATCTCAAGGAAGGAGGAGCTGAAGCCATGCTAGAAGAATTAGTATGTAAACAAAGCATGCATGCACAAAACAACTTACTGGTTGAATTTCATATTAGAGTGTTGGATTTGATCCTAAACAATTCGGGAAATGAGTCTCCTAGGGATGAAAATAATTCATGGTTGAAACATCTGGAGGATTTAATCATGAAATCGTATCATATACTAAATGATTTTCCTTTGGATTGGCTTCAAGAAGGCATCAGTGGATATTATAAGTTGGATTTGTCTCAAAAGTTTAAACTGATGACTTTTCTCTGTGACGAAGCTCTGAATACTGAGAAATTGAGGAGCTATATTCATGAGGAAAATTCAAGACATGAAAAAGAAGTGAAAGAAGCAAAACACAAGGTTGCTGCAACCAAGGAAAAGGTAAAGTGTCTTCAGAAGAAGTTGCGGAGTGAGAAAGCCAAAGTTGTTCCTTCAACTGTGTCTCCCTATCCGATGGAGGAGCATGAGACTCTTCTTTCGAAAATAAGAATTGAGGTTGATGAAGCACACACTGAGATGCTTGGATTAAAGGGCACAACTCGAAAAGCGAAACTAGGTTGTGATGCTTTGAGGATCAAACCTGAATTTGTGGACAATAATGGTAAAGCATTCTGGAATTTTAGAAGTTGCAGTAGTGAATGTACTGTTTTTTTGCAAGAAATTAAAATACAGGATGAAATTGCCAAAGCACCAGAAGAAAAGTGGTATGTTTATGGTCCTGACAAGAAGGAAGAGGTTCATAAATATATTTCCACAAGGGCTAAAAGACTTAACCGTCAGAAGGCTTCTCACTAG 1743 0.405 MCGGATVFSGHQFFGLPHTTHPYPPINSVTACFFISDSANCWCQSLQLGFNATVFGPHILIFSMDLNACFTYSDAQSLREKCATPILKQVKSDFTRYWYGDEQHLDEAWKQIFLYDHCRQKKEDFAATCKNLKKGKPCPIKYCHKCLLTRYGENAEEVAHLADWTCPKCRGFCNCSLCQKKRGEQPTGPLYRNAKESGFKSVAEMLAVKKTIEASGLNKELEVHLSGEFGKQNCTDTNDTKVCNKEYDGGDNVGAMIQGESKIIEEEILLPPGTELKEILGIELPLKEVGNALQLLEFCKVFGKALDLKEGGAEAMLEELVCKQSMHAQNNLLVEFHIRVLDLILNNSGNESPRDENNSWLKHLEDLIMKSYHILNDFPLDWLQEGISGYYKLDLSQKFKLMTFLCDEALNTEKLRSYIHEENSRHEKEVKEAKHKVAATKEKVKCLQKKLRSEKAKVVPSTVSPYPMEEHETLLSKIRIEVDEAHTEMLGLKGTTRKAKLGCDALRIKPEFVDNNGKAFWNFRSCSSECTVFLQEIKIQDEIAKAPEEKWYVYGPDKKEEVHKYISTRAKRLNRQKASH* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00741 580 PANTHER OS05G0300700 PROTEIN 117 479 IPR040221 GO:0006355
Phac4g00741 580 Pfam Protein of unknown function (DUF2854) 71 116 IPR021275 -
Phac4g00741 580 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 389 419 IPR028942 -
Phac4g00741 580 ProSiteProfiles DDT domain profile. 286 350 IPR018501 -
Phac4g00741 580 Pfam DDT domain 288 346 IPR018501 -
Phac4g00741 580 SMART testlast3 286 350 IPR018501 -
Phac4g00741 580 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 117 206 IPR018866 -
Phac4g00741 580 Coils Coil 468 488 - -
Phac4g00741 580 Coils Coil 423 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00741 Phac-Chr4 9229082 9240249 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Phac4g00741 zf-4CXXC_R1 6.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00741 - - pvu:PHAVU_004G063200g 899.427