Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00737 ATGCTCGTGTATTGTCAATATTCTGTCATTGAACTATCTTTTTTGCAGTATGCACAACTCATGCCAGCATGCTTCACATATTCAGATGCTCAAAGCTTGAGGGAAAAATGTGCAACCCCAATTCTTAAGCAGGTGAAGAGTGATTTTACCAGATATTGGTATGGAGATGAGCAGCATTTGGATGAGGCATGGAAACAAATATTCTTATATGACCATGTATGGATGAGACATCATTCTTCTTCTCCTGTTCTAAAATTGATTCTTGTAGAAGTATGCTTGTCAATTTTGCATCATATAGGGAAAGGCAGACAGAAGTACCCTACCAAAATTGCAAACCAGCCGTCTTCCCTTTGTTGCTCTCTTCACCTCACCATTCAAGGAGGGAATTCCTTTTCCTATTTCAACATGGATAACCAATTGTTTTCTACCCAGAATAAGAACTTCGAGGAGGGGTTGGCCAGTGGCGATTCAAATTCTTGTCCCGTTCAAATAGGGACAAATGGGAAATCTTGCCACCAATGCCGGCAAAAGAAAGAGGATTTTGCTGCAACATGCAAGAACTTGAAGAAAGGGAAGCCTTGTCCGATTAAGTACTGCCACAAGTGCCTCTTGACTAGGCTTGATATGCTTAGCACCACTGTGGAAGAAGACATCTCAACAAGGTATGGGGAGAATGCTGAAGAAGTGGCACATTTGGCTGATTGGACATGTCCGAAGTGTCGAGGGTTTTGCAACTGCAGCTTATGCCAGAAAAAACGAGGTGAGCAACCTACTGGTCCCCTATATCGCAATGCCAAAGAATCTGGTTTTAAGTCTGTGGCGGAAATGCTTGCCGTTAAGAAGACTATAGAAGCTTCAGGATTAAATAAGGAGCTTGAAGTACATCTCTCGGGGGAATTTGGGAAACAAAATTGTACAGATACAAATGATACTAAAGTTTGCAACAAAGAGTATGATGGAGGTGATAATGTTGGTGCCATGATCCAAGGAGAGAGCAAAATAATTGAGGAGGAAATTCTTTTGCCCCCTGGAACAGAGTTAAAAGAAATACTTGGTATTGAGTTACCACTCAAAGAAGTTGGGAATGCATTGCAACTCTTAGAGTTTTGCAAAGTATTCGGAAAGGCTCTTGATCTCAAGGAAGGAGGAGCTGAAGCCATGCTAGAAGAATTAGTATGTAAACAAAGCATGCATGCACAAAACAACTTACTGGTTGAATTTCATATTAGAGTGTTGGATTTGATCCTAAACAATTCGGGAAATGAGTCTCCTAGGGATGAAAATAATTCATGGTTGAAACATCTGGAGGATTTAATCATGAAATCGTATCATATACTAAATGATTTTCCTTTGGATTGGCTTCAAGAAGGCATCAGTGGATATTATAAGTTGGATTTGTCTCAAAAGTTTAAACTGATGACTTTTCTCTGTGACGAAGCTCTGAATACTGAGAAATTGAGGAGCTATATTCATGAGGAAAATTCAAGACATGAAAAAGAAGTGAAAGAAGCAAAACACAAGGTTGCTGCAACCAAGGAAAAGGTAAAGTGTCTTCAGAAGAAGTTGCGGAGTGAGAAAGCCAAAGTTGTTCCTTCAACTGTGTCTCCCTATCCGATGGAGGAGCATGAGACTCTTCTTTCGAAAATAAGAATTGAGGTTGATGAAGCACACACTGAGATGCTTGGATTAAAGGGCACAACTCGAAAAGCAAAACTAGGTTGTGATGCTTTGAGGATCAAACCTGAATTTGTAGACAATAATGGAAAAGCATTCTGGAATTTTAGAAGTTGCAGTAGTGAATGTACTGTTTTTTTGCAAGGGCTAAAAGACTTAACCGTCAGAAGGCTTCTCACTAGCTTTTCAAGAAAGTTTGTAGGAATTTTATGGTTTTGGTAG 1896 0.3982 MLVYCQYSVIELSFLQYAQLMPACFTYSDAQSLREKCATPILKQVKSDFTRYWYGDEQHLDEAWKQIFLYDHVWMRHHSSSPVLKLILVEVCLSILHHIGKGRQKYPTKIANQPSSLCCSLHLTIQGGNSFSYFNMDNQLFSTQNKNFEEGLASGDSNSCPVQIGTNGKSCHQCRQKKEDFAATCKNLKKGKPCPIKYCHKCLLTRLDMLSTTVEEDISTRYGENAEEVAHLADWTCPKCRGFCNCSLCQKKRGEQPTGPLYRNAKESGFKSVAEMLAVKKTIEASGLNKELEVHLSGEFGKQNCTDTNDTKVCNKEYDGGDNVGAMIQGESKIIEEEILLPPGTELKEILGIELPLKEVGNALQLLEFCKVFGKALDLKEGGAEAMLEELVCKQSMHAQNNLLVEFHIRVLDLILNNSGNESPRDENNSWLKHLEDLIMKSYHILNDFPLDWLQEGISGYYKLDLSQKFKLMTFLCDEALNTEKLRSYIHEENSRHEKEVKEAKHKVAATKEKVKCLQKKLRSEKAKVVPSTVSPYPMEEHETLLSKIRIEVDEAHTEMLGLKGTTRKAKLGCDALRIKPEFVDNNGKAFWNFRSCSSECTVFLQGLKDLTVRRLLTSFSRKFVGILWFW* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00737 631 Coils Coil 494 528 - -
Phac4g00737 631 Pfam Protein of unknown function (DUF2854) 15 71 IPR021275 -
Phac4g00737 631 ProSiteProfiles DDT domain profile. 357 421 IPR018501 -
Phac4g00737 631 PANTHER OS05G0300700 PROTEIN 166 550 IPR040221 GO:0006355
Phac4g00737 631 Pfam DDT domain 359 417 IPR018501 -
Phac4g00737 631 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 460 490 IPR028942 -
Phac4g00737 631 Coils Coil 539 559 - -
Phac4g00737 631 SMART testlast3 357 421 IPR018501 -
Phac4g00737 631 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 166 277 IPR018866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00737 Phac-Chr4 9181530 9192631 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Phac4g00737 DDT 1.6e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00737 - - pvu:PHAVU_004G063200g 706.442