Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00733 ATGTGTGGTGGAGCTACTGTCTTCTCCGGTCACCAGTTCTTCGGTCTTCCTCATACAACTCATCCCTACCCACCGATCAACTCGGTCACTGCCTGCTTCTTCATCTCGGATTCTGCCAAATGCCGGTGCCAATCGCTTCAGCTTGGTTTCAATGTTATTGAAATGCCACTTAAGGTCAACTCTAGAGGGGGAGGGTTGATAGTCGACAGTCTAATTATGCACAACTCATGCCAGCATGCACAACTCATGCCAGCATGCTTCACATATTCAGATGCTAAAATCTTGACGGAAAAATGTGCAACCCCAATTCTTAAGCAGGTGAAGAGTGATTTTACCAGATATTGGTATGGAGATGAGCAGCATTTGGATGAGTCATGGAAACAAATATTCTTATATGACCATTGCCGGCAAAAGAAAGAGGATTTTGCTGCAACATGCAAGAACTTGAAGAAAGGGAAGCCTTGTCCGATTAAGTACTGCCACAAGTGCCTCTTGACTAGGCTTGATATGCTTAGCACCACTGTGGAAGAAGACATCTCAACAAGGTATGGGGAGAATGCTGAAGAAGTGGCACATTTGGCTGATTGGACATGTCCGAAGTGTCGAGGGTTTTGCAACTGCAGCTTATGCCAGAAAAAACGAGGTGAGCAACCTACTGGTCCCCTATATCGCAATGCCAAAGAATCTGGTTTTAAGTCTGTAGCGGAAATGCTTGCTGTTAAGAAGGCTTCGGAAGATTCAGGATTAAATAAGGAACTTGAAGTGCATCTCTCAGGGGAATTTGGGAAAGAAAATTGTATAGATACAAATGATGCCTCTAAAGTTTGCAACAAAGAATATGATGGAGGTGATAATGTTGGTGCCCTCTTCCTAGAAGAGAGCAAAACAATTGAGGAGGAAATTCTTTTGCCCCCTGGAACAGAGTTAAAAGAAATATTTGGTATTGAGTTACCACACAAAGAAGTTGGGAATGCATTGCAACTCTTAGAGTTTTGCAAAGTGTTCGGAAATGCTCTTGATCTCAAGGAAGGAGAAGCTGAAGCCATACTAGAAGAATTAGTATGTAAACAAAACATGCATGGACAAAACACCTTACTGATTGAATTTCATATTAGAGTGTTGGACTTGATCCTAAACAATTCGAGACATGAGTCTTCATCCTTACCTACTAGGGATGGAAATAATTCATGGTTGAAACATGTGGAAGATTTAATCATGAAATCGTATCATGTATTAAATGATTTTCCTCTGGATTGGCTTCAAGAAGGAATCAGTGGATATTATAAGTTGGATTTGTCTAAAAAGTTTAAACTGATGACTTTTCTTTGTGACGAAGCTCTGAACACTGAGAAATTGAGGAGTTATATTCATGAGGAAAATTCAAGACATGCAAAAGAAGTGAAGGAAGCAAAACATAAGGTTGCTGCAACTAAGGAAAAGGTAAAGTGTCTTGAGAAGAAGTTGCGGAGTGAGAAGGCCAAAGTTGTTCATTCAACTGTGTCTCCCTTTCCGATGGAGGAGCATGAAGCTCTTCTTTCAAAACTAAGAATTGAGATTGATGAAGCACACACTGAAATGCTTGGGTTAAAGGGCACTACTCAAAAAGCAAAACTAGGTTGTGATGCTTTGAGGATCAAACCTGAATTTGTAGACAATAATGGAAAAGCATTCTGGAATTTTAGAAGTTGCAGTAGTGAATGTACTGTTTTTTTGCAAGATATTAAAATAGAGGATGAAATTGCCAAAGCACCGGAAGAAAAGTGGTATGTTTATGGTCCTGAGAAGAAGGAAGAGGTTCATAAATATATTTCCACAAGGTGA 1821 0.402 MCGGATVFSGHQFFGLPHTTHPYPPINSVTACFFISDSAKCRCQSLQLGFNVIEMPLKVNSRGGGLIVDSLIMHNSCQHAQLMPACFTYSDAKILTEKCATPILKQVKSDFTRYWYGDEQHLDESWKQIFLYDHCRQKKEDFAATCKNLKKGKPCPIKYCHKCLLTRLDMLSTTVEEDISTRYGENAEEVAHLADWTCPKCRGFCNCSLCQKKRGEQPTGPLYRNAKESGFKSVAEMLAVKKASEDSGLNKELEVHLSGEFGKENCIDTNDASKVCNKEYDGGDNVGALFLEESKTIEEEILLPPGTELKEIFGIELPHKEVGNALQLLEFCKVFGNALDLKEGEAEAILEELVCKQNMHGQNTLLIEFHIRVLDLILNNSRHESSSLPTRDGNNSWLKHVEDLIMKSYHVLNDFPLDWLQEGISGYYKLDLSKKFKLMTFLCDEALNTEKLRSYIHEENSRHAKEVKEAKHKVAATKEKVKCLEKKLRSEKAKVVHSTVSPFPMEEHEALLSKLRIEIDEAHTEMLGLKGTTQKAKLGCDALRIKPEFVDNNGKAFWNFRSCSSECTVFLQDIKIEDEIAKAPEEKWYVYGPEKKEEVHKYISTR* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00733 606 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 179 238 IPR018866 -
Phac4g00733 606 Pfam DDT domain 321 379 IPR018501 -
Phac4g00733 606 Coils Coil 460 494 - -
Phac4g00733 606 Coils Coil 505 525 - -
Phac4g00733 606 SMART testlast3 319 383 IPR018501 -
Phac4g00733 606 ProSiteProfiles DDT domain profile. 319 383 IPR018501 -
Phac4g00733 606 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 426 456 IPR028942 -
Phac4g00733 606 PANTHER OS05G0300700 PROTEIN 134 514 IPR040221 GO:0006355
Phac4g00733 606 Pfam Protein of unknown function (DUF2854) 78 133 IPR021275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00733 Phac-Chr4 9142827 9153533 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Phac4g00733 DDT 2.9e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00733 - - pvu:PHAVU_004G063200g 931.784