Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00681 ATGCAATCATCTTCTTCTTCTTCCTTCTGTTACATATTTAAATATGATGTGTTCCTTTCTTTTCGAGGGAAAGATACCCGTCAAGGTTTCACCGGCAATCTCTACAAAGCTCTTTGTGACAGAGGAATTCGCACCTTCATCGATGACCACCATCTTCCTAGAGGGGATCAGATTACCTCTGAACTTGAGAACGCAATCCAAGAGTCCAGAATTTTCATCATTGTTCTCTCTCAAAACTATGCATCTTCCTCCTTCTGCTTAAATGAACTTGATTACATCCTGAGGTTTATTAAGCATAAGGGTCGGTTGGTTTTGCCAGTTTTTTATGGAGTTGACCCTTCTGATGTGAGACACCACACAGGTAGTTTTGGAGAGGCATTGGCTCATCATCAAGAGAAGTTGAATTCTTATTGTAACATGGAGAAGCTGGAGACATGGAAGATGGCTCTGCATCAGGGAACTGGTAAGATTGAAATCATATGCATGGATTTCCCTTCATTTGAAGAAGTAGAAATAGAATGGGATGGAGATGCCTTCAAGAAGATGAAAAATCTCAGAACACTTATTATCAGAAATGGTCATTTCTCCAAAGGTCCCAAACATCTTCCTAATTCTTTAAGAGTGATGGAATGGTGGAGATATCCTTCACAGAATTTTCCATATGATTTTCATCCGAAGAAACTTGCCATATTCAAGTTACCCTATTGTGAGTTTACATCACTAGAGTTGACTGACTTACTAAGAAAGGCAATTAACTTCAAGAAGTTTGTGAATATGACTAGTCTAAATTTTGACGAATGTCCATATTTAAAGCAGATACCTGATGTATCTTGTCTTACACATTTGGAAAATTTGTCATTTCGATGGTGTCCCAAGTTATTTTCACTTCACTGTTCAGTTGGATTCTTGGAAAAACTTAAAATCTTACACGCAGAAGGTTGCTCCAGGCTCAAGAGTTTTCCTCCCATCAAGCTAACCTCTCTTCAGCAACTCAAACTTCGGTATTGTCAAAGTCTTGAAAATTTTCCAGAAATATTAGGAAAGATGGAAAATATAAGAGAACTTGACTTGAAAGAAACTCCTATAAAAAAATTCCCACTTTCATTTCGAAATCTTACTCGGCTGCAAAAGTTACATCTGTGTTTAAGAGTTAAAGTCAAGAAAAATGGTTGTGATGGCCTTCCCCTTTCAAGCATTTGCTTGATGCCAGAACTGGTCAATATTGCAGCTAGTGGATCGGGTGGGGAGCTTTTCTCTGAAGCCAATGAGGGTGCAGAAAAAGTGAGCTCAATCTTGTCTACAAATGTTGAACATCTTCAGCTCAGATGCTGCAACCTAACAGATGAATTTTTTTCAATACTTCTCCCATGGTTTGCTAATATAAAGAACTTGGACCTATCAAGGAATAATTTCACAGTCATTCCAGAATGCATCAAAGAATGCCACTTTTTAACTAGGCTTAATTTGAATTTTTGTGAGCGACTTCGAGAAATTAGAGGCATTCCTCCAGCCTTAAAATATTTCTCTGCAATAGATTGCCTATCCTTGACTTCCTCATGTAGAAGCATGTTACTGAATCAGGAACTGCATGAGGCTGGAAGGACCTTCTTTTATTTGCCAGGAGCCAAGATTTCAGAGTGGTTTGAGTTCCAAACATTGGAATTGCCAATTTCTTTCTGGTTTGGTAAAAAACTCCCAGCCATGGTTATTTGTCTTGCTATGGAACGGGTGTGTGAGTATTCCTCATCAAAAGGTGGTAAACAAAGACCCTTGGTGATCCAAAGTACATTTAGACTCATGTCACCTATTGTGATCATCAATGGCAATGAACATTTGTTAGAGAGTTGGGAGATGATAGATGATTGTACTTGTGTTTTTGACCTGAGGGAGACAAAACTAAAAACTGATTTAGAAGAACTTTTGGAAAATGAATGGAACCATGCAGAGGTTACATGTCGATATGTTAGTTTTGGCCAAACCTTTATAAAACATGGAATCCATGTATTGAAACAGGAAAGTAGCGTGGAGGAGATTCGATTCACTGATCCTTGTAGAAAAAGAAATCTGGATGATGATCCCAATAGTCCAAAATCACAAAACCAACAGTTGCTGAAAAAACAAAGATGA 2127 0.3818 MQSSSSSSFCYIFKYDVFLSFRGKDTRQGFTGNLYKALCDRGIRTFIDDHHLPRGDQITSELENAIQESRIFIIVLSQNYASSSFCLNELDYILRFIKHKGRLVLPVFYGVDPSDVRHHTGSFGEALAHHQEKLNSYCNMEKLETWKMALHQGTGKIEIICMDFPSFEEVEIEWDGDAFKKMKNLRTLIIRNGHFSKGPKHLPNSLRVMEWWRYPSQNFPYDFHPKKLAIFKLPYCEFTSLELTDLLRKAINFKKFVNMTSLNFDECPYLKQIPDVSCLTHLENLSFRWCPKLFSLHCSVGFLEKLKILHAEGCSRLKSFPPIKLTSLQQLKLRYCQSLENFPEILGKMENIRELDLKETPIKKFPLSFRNLTRLQKLHLCLRVKVKKNGCDGLPLSSICLMPELVNIAASGSGGELFSEANEGAEKVSSILSTNVEHLQLRCCNLTDEFFSILLPWFANIKNLDLSRNNFTVIPECIKECHFLTRLNLNFCERLREIRGIPPALKYFSAIDCLSLTSSCRSMLLNQELHEAGRTFFYLPGAKISEWFEFQTLELPISFWFGKKLPAMVICLAMERVCEYSSSKGGKQRPLVIQSTFRLMSPIVIINGNEHLLESWEMIDDCTCVFDLRETKLKTDLEELLENEWNHAEVTCRYVSFGQTFIKHGIHVLKQESSVEEIRFTDPCRKRNLDDDPNSPKSQNQQLLKKQR* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00681 708 Gene3D Ribonuclease Inhibitor 347 533 IPR032675 -
Phac4g00681 708 SMART till_3 14 156 IPR000157 GO:0007165
Phac4g00681 708 ProSiteProfiles TIR domain profile. 13 150 IPR000157 GO:0007165
Phac4g00681 708 Gene3D - 11 163 IPR035897 -
Phac4g00681 708 MobiDBLite consensus disorder prediction 684 708 - -
Phac4g00681 708 SUPERFAMILY L domain-like 174 522 - -
Phac4g00681 708 MobiDBLite consensus disorder prediction 694 708 - -
Phac4g00681 708 Pfam TIR domain 14 152 IPR000157 GO:0007165
Phac4g00681 708 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 151 IPR035897 -
Phac4g00681 708 Gene3D Ribonuclease Inhibitor 165 346 IPR032675 -
Phac4g00681 708 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 160 497 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00681 Phac-Chr4 8352174 8356023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00681 153 380 WRKY Transcription Factor Family AT4G12020 32.489 9.84e-21 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00681 - - vra:106767662 889.026