Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00640 ATGTTCCAAGGTGGTACAATGAGACATTTTTTTTCCCTTTATCTTGTGGTTCTTTCATGGTTCTTTTTCATCCCAAACACTCAGGAATTACAAGCTGCTCAGACACAAGCCTTGTTGCAGTTAAGAGTTTATCTAGAGTATCCTTCCTCTTTACAAATTTTGGACTATTACCAGGGGGACCTGTGCTGGCTCTCTCCATCTGCAAACCTGAGCATTAAATGTGAAGATGATGAGGTAACTGAGCTTAAAATTACGGGTGAAAAATCTTTGAAGCCACCATGGTTCAATGGATATGCAGTTCCTAATCAGACTCTATCCATGAATTTCTCCATTGATTCCTTTTTCATCACTTTGACAAGGTTAACCAGCTTAAGGGTTCTTAGCTTGGTGTCCTTGGGGATTTGGGGGCCACTTCCTGATAAGATTCACAGTTTCACTTTGCTTCAAGTTTTGGACTTGAGTTCCAATTTCTTATTTGGAGACATTTCACCAAAAATATCCACAATGGTAAAGCTTCATGCACTGACCCTTGATGACAATTATTTTAACACCACTATGCCCGATTCGTTTGATTCTCTGTCCAATCTGAATATCTTGAGTGTGAAGAGCAATGGTTTAAAGGGTTCCTTCCCCTCCTCACTGGGAAAAGTTAAGACACTTGAAGTTATTTCCTTGTCCCACAATGAGTTGTCTGGTGACTTGCCTGGTCTCAGTTCTCTCACTGGCCTACATGTTCTGGATTTAAGAGAAAACCATTTAGAATCTGAACTACCATTGTTGCCTAAATCTGTGGTCACTGTGCTGCTTAGCAATAACTCGTTTTCAGGAGAGATACCTAATCAGTTTCATGAACTGGATCAGCTTCAACATCTAGATCTTTCTTCAAATTACCTCAGTAAGACACCACCATCTACCTTGTTTTCTCTACCAGAAATAAGTTATTTGAATCTGGCGAGCAATGTGCTAAGTGGGACCCTCCCAGACAAACTTAACTGTGGTAGCAAACTTGGGTTTGTGGACATTTCTCGTAACAAGTTAAGCGGTGGACTTCCTTCTTGCTTGGCGAATACATCTGATAGCAGAGTTGTTAGATATGCTGGAAACTGTTTATCTGTTGATTCTCAGAACCAGTATAGAGGGTCCTATTGTAAAGAATCTTCCTCTGGATGGAAAAGCTTCAAGACATGGGAAGTAGCTGTAGTAATGATCATCATTGTTGTACTTGTTCTTGTGCTTTTGGGGTCGAGCGTCTTCTTATGGAAAAAGTATCATTCCAGAAAGACAACTGGGCAAGATAGCTCCTCAATAGGGGTTCCGTCAGAGATCCTTGCAAATGCCAGATTTATTTCTCAAACAATGAAGCTAGGGACACAAACTATTCCAACCTGTCGGCAATTTTCAATAGAGGAACTCAAGGAAGCCACAAAAAACTTTGACTTGTCAACTTATATTGGTCAAGGCTCCATTGGCAAGATGTACAAAGGTAAACTGGATAATGGATCCTACGTGGCAATACGGTCTTTGCCTCTGTCAAAGAAATGCTCAATTCAAACTCTCAGAGCTAAACTGGATTTACTCTCAAAACTTCATCATCCAAATTTGGTTAGCCTTTTGGGTCATTGTATTGATGGTGGAGGACAAGATGATTTCAATTCCCACAAACTTCATCTTGTATATGAGTATGTGCCAAATGGGAATTATCATGCCCATCTGTCAGAATTTTCTGTAGGGAAGGCACTTAAGTGGTCTGATAGATTGGCAATTTTAATTGGAGTTGCAAAGGCAGTGCATTTCTTACATACTGGTGTTATACCTGGCTGCTTTAGTAACCTACTAAAGACAAAGAATGTCTTGCTTGATGAACACTGCATTCCAAAACTAAGTGACTATGGTATGTCCATTATCACAGAAGAAATTGAGAAGTTTGAGGCAAAGGGTGAGAAATCAAAGCCATGGTATGATACCAAACCTCAGTTTAGTTTTGCAGAACAGCCTGCAATTCAATAA 2007 0.4006 MFQGGTMRHFFSLYLVVLSWFFFIPNTQELQAAQTQALLQLRVYLEYPSSLQILDYYQGDLCWLSPSANLSIKCEDDEVTELKITGEKSLKPPWFNGYAVPNQTLSMNFSIDSFFITLTRLTSLRVLSLVSLGIWGPLPDKIHSFTLLQVLDLSSNFLFGDISPKISTMVKLHALTLDDNYFNTTMPDSFDSLSNLNILSVKSNGLKGSFPSSLGKVKTLEVISLSHNELSGDLPGLSSLTGLHVLDLRENHLESELPLLPKSVVTVLLSNNSFSGEIPNQFHELDQLQHLDLSSNYLSKTPPSTLFSLPEISYLNLASNVLSGTLPDKLNCGSKLGFVDISRNKLSGGLPSCLANTSDSRVVRYAGNCLSVDSQNQYRGSYCKESSSGWKSFKTWEVAVVMIIIVVLVLVLLGSSVFLWKKYHSRKTTGQDSSSIGVPSEILANARFISQTMKLGTQTIPTCRQFSIEELKEATKNFDLSTYIGQGSIGKMYKGKLDNGSYVAIRSLPLSKKCSIQTLRAKLDLLSKLHHPNLVSLLGHCIDGGGQDDFNSHKLHLVYEYVPNGNYHAHLSEFSVGKALKWSDRLAILIGVAKAVHFLHTGVIPGCFSNLLKTKNVLLDEHCIPKLSDYGMSIITEEIEKFEAKGEKSKPWYDTKPQFSFAEQPAIQ* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00640 668 PANTHER UNNAMED PRODUCT 117 646 - -
Phac4g00640 668 SUPERFAMILY Protein kinase-like (PK-like) 458 640 IPR011009 -
Phac4g00640 668 Pfam Protein tyrosine and serine/threonine kinase 480 649 IPR001245 GO:0004672|GO:0006468
Phac4g00640 668 SUPERFAMILY L domain-like 88 371 - -
Phac4g00640 668 Pfam Leucine rich repeat 171 230 IPR001611 GO:0005515
Phac4g00640 668 Pfam Leucine rich repeat 265 322 IPR001611 GO:0005515
Phac4g00640 668 MobiDBLite consensus disorder prediction 647 668 - -
Phac4g00640 668 ProSiteProfiles Leucine-rich repeat profile. 219 241 IPR001611 GO:0005515
Phac4g00640 668 ProSiteProfiles Leucine-rich repeat profile. 287 308 IPR001611 GO:0005515
Phac4g00640 668 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 441 561 - -
Phac4g00640 668 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 31 262 - -
Phac4g00640 668 ProSiteProfiles Protein kinase domain profile. 478 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00640 668 Gene3D Ribonuclease Inhibitor 31 262 IPR032675 -
Phac4g00640 668 Gene3D Phosphorylase Kinase; domain 1 449 561 - -
Phac4g00640 668 Gene3D Transferase(Phosphotransferase) domain 1 562 655 - -
Phac4g00640 668 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 264 388 - -
Phac4g00640 668 Gene3D Ribonuclease Inhibitor 263 376 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00640 Phac-Chr4 7740199 7745786 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00640 7 658 Miscellaneous Gene Families AT5G14210 52.985 0.0 668
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Phac4g00640 PK_Tyr_Ser-Thr 5.4e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00640 - - gmx:100799183 1061.21