Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00619 ATGAGTGACTCATTACACTTCAGGAATGGTGGTTGTGGGTTCAGTGCTGAAATGAATGTTTTTCCTTCACCTCCTCCTGTTACTGTTATTGGTCTCCACTCTTTCAACATTTTAGGGGTGATGGGTCATGTTGAAGGCAAGAAATCTGAAAGTTTTGATATACCCTTTCAGATTTTGAACCCTTCTGTGATCCATCCCTCCCAGGAGGAAGAAGCATCTTTTGGGGTTGAAGCCATGAGCTTGTCTTTGAAACCTGGTGAAGAGCTTGAAGCTAATAGTTATTCTGCTACAGGGAAAATTAGACACACTAAACTTTGTGCCAGAGGACATTGGAGACCAGCTGAAGATGTCAAACTTAAAGAGCTTGTTGCACAATTTGGAGCTCAAAATTGGAACTCAATAGCTGAACATCTTCCAGGAAGATCAGGAAAAAGTTGCAGATTGAGGTGGTTTAACCAGCTAGATCCAAGAATTAACAGAAAGGCTTTCAGTGAGGAAGAAGAGGAGAGACTCTTGAATGCTCACAAAGTGTATGGTAACAAATGGGCCATGATTTCTAGACTCTTCCCAGGTAGGACAGATAATGCAGTGAAGAACCATTGGCATGTGATCATGGCTAGGAGGCAAAGGGAGAAGTCATGTGTCTACAAAAGGAGAAAGCCCACATTTCAGATCCTGCCACCAAAGGATTTGGATTTGACCTTGCCAATAAATGGAAGCAGTGAATCAACCATTTCAAGCACCATCATTGATGAATCTGCCTCAACAGGAACTAACCTCTCCTTCACTCCCTCTTCAGCCAAACCAACTCCTCTGCCTTTTAGCAACCATTGTCCTGTTCAGAATCTCCAAGCCTTTGGTGCTCTAATGGATTTATCTGGAGAAAGCAGGACAACAGCCAGAAATGGGAGTTTTAACAAGCATATTGGTGCTTGGAAAGGTTCATGTGAAGCTGGACACATGGGAAGGCTCATGGGTGTGGACCAATCCCATTGCTCAGATTCAAACTCATCAGAAGTTTCAGTATCTGAGTCAGTTGCCACCAACAAGATTACCAATCTCTCAATGTATGAGAAAAGTGATAATAGAGCCAACATGTTATTCATTGACTTTCTTGGAGTAGGAGCTACATAA 1134 0.4259 MSDSLHFRNGGCGFSAEMNVFPSPPPVTVIGLHSFNILGVMGHVEGKKSESFDIPFQILNPSVIHPSQEEEASFGVEAMSLSLKPGEELEANSYSATGKIRHTKLCARGHWRPAEDVKLKELVAQFGAQNWNSIAEHLPGRSGKSCRLRWFNQLDPRINRKAFSEEEEERLLNAHKVYGNKWAMISRLFPGRTDNAVKNHWHVIMARRQREKSCVYKRRKPTFQILPPKDLDLTLPINGSSESTISSTIIDESASTGTNLSFTPSSAKPTPLPFSNHCPVQNLQAFGALMDLSGESRTTARNGSFNKHIGAWKGSCEAGHMGRLMGVDQSHCSDSNSSEVSVSESVATNKITNLSMYEKSDNRANMLFIDFLGVGAT* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00619 377 FunFam MYB transcription factor 108 159 - -
Phac4g00619 377 Gene3D - 108 159 - -
Phac4g00619 377 CDD SANT 111 152 IPR001005 -
Phac4g00619 377 SUPERFAMILY Homeodomain-like 108 201 IPR009057 -
Phac4g00619 377 SMART sant 107 156 IPR001005 -
Phac4g00619 377 SMART sant 159 207 IPR001005 -
Phac4g00619 377 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 155 209 IPR017930 -
Phac4g00619 377 CDD SANT 162 202 IPR001005 -
Phac4g00619 377 ProSiteProfiles Myb-like domain profile. 108 154 IPR001005 -
Phac4g00619 377 ProSiteProfiles Myb-like domain profile. 155 205 IPR001005 -
Phac4g00619 377 Pfam Myb-like DNA-binding domain 111 171 - -
Phac4g00619 377 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 154 IPR017930 -
Phac4g00619 377 PANTHER MYB PROTEIN-RELATED 108 310 - -
Phac4g00619 377 Gene3D - 161 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00619 Phac-Chr4 7369639 7372025 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00619 103 377 MYB Transcription Factor Family AT5G17800 44.211 2.56e-66 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac4g00619 Myb_DNA-bind_6 1.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00619 K09422 - gmx:100791795 357.451