Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00608 ATGGGGAGCAGAAAGGAAGAAGAGAAGAACGAGAAAATTATCAGAGGTCTCATGAAGCTTCCACCTAATCGAAGATGTATCAACTGCAATAGCTTGGGACCACAATATGTATGTACAAGTTTTTGGACTTTCATTTGCACGACATGCAGTGGAATACATCGTGAGTTTACTCATCGTGTGAAGTCCGTCTCGATGGCAAAGTTCACTTCACAAGAAGTCGATGCTCTTCAAAGTGGGGGTAACCAGCGTGCAAGGGAAATATATTTGAAAAATTGGGACTTTCAAAGGCAGCGGTTGCCAGATAACAGCAATGTTGATAAAATAAGGGAATTTATAAAGAGTGTATATGTGGATGGAAGATATGCTGCAAGCCATGGGATTCATCAAGATGAGATTAGGCGCGCCAGTTCTTATCATTCGTATTCTCAAAGTCCTCCATATGATTATCAATATGAGGATAGGAAGTATGGAAAACAAGCAGCTGCGCTTACCAGGAAGCCTGGTTCAGATAAAGCTCGATATGAAGGGAAGATTTCTAGTATTATCTATAGTCCTGGCCGCTTCAGTGATCATGCATATGATGACAGATTTGCAAATGAAGGATCTGGCCCAAGAATTTCTGACTTTTCTGTGTCTAGTGGTGGCGAACAATTCAAATCTGATGTTCAGTCTCCCAATTTCTATAAAGATATCAAGATTAGCAGTCCATCCTATCAAAGGCGTTCTGGTTCCAGTTCGAGTGAAGATGTGTGGTCCCAAGCAAGAAATGCATCTCTGGAAACTAATGTTAATGCCAAGAGAGATGCAGATGGAATTCTTCCTCCGCAGAGAACTGCATCTGCACAATCAGCAGACAACAGATTTTCGTCCTTGAGATCTTATAACTCTGGCAGTTTAGTTGATTTTTTCTCTGAACCAGTTCAACCTTCAGAACCACTTCAGAATAAAGCATTTGGCATTCCACGACCACCTGGTCCTACAAGATCTGTTAGCATGGACCTCTCCAAGGCACCACTGGAATCAGCAACAGCATCTCACGCTCCAACAGTGGATCTGTTTCAATCATCTTTTTCATCTGCAGTTCCATTTTTCAATGAGAATCAACTTACTCAAGCATCCCAACTTGCATCTGTTGATTTTTTTGCCAATCTCTCTGAGGAGCCTTCTACTGTAAACTCAAATGAAAAGGCACTGGATTTTTCTGTCCCTAAAAATGAAGGATGGGCAACTTTTGATGTGCCTCAGAGCACCTCATCTACAGCACAAGTGGAAATTCCAGCCACTGTACCCTCAAGTTCTAAATCTTTACAAGAAGGATTTGATCCATTTCCCACCTCAAATGCAAACACACAATGGCCATCTTTTGAATTTTCTAGTGTCGGTATACATTCTTCACTCACATCTAATTTGTGGCATGATGGTGTGTGGAATGGAGAAGAACAAGTTTCTACTATGTCAGCAAACACTCAACCATGGAATGCATTTGAAGAATCTGGTGGCCATCATCCTGTGGATGCCCTTAGTCAAGGATTACAATTTCACAATTGTCCCACAGCTGATAATCAAATTTTGGGATTAAGAGAGTCTGAGGGTTCCAAAAGTGATGGCGTTAAAGGCATAGCCCCTGTTGGTGGATTTGATAATCATGACATCCCATCGCATTTCAGTGGCTCAGCATTTCCCCCACCCATGCTCCCTCCAATGGGAGACACTGAACCTATTGGAATGAAACGTAAATCAACTAATCCATTTGATTATCCTCATGAATCTGATGTAGATCACAACAATATGTTTCTTGATATGAGCTCTTTGCAAGATGCACTGCCAGATACCCTGTTTCCAACCTCCTTCCATAGTGGTATAGCTGAATCTTGGCTTCCTAAAAACACGGTGACCCCTTATATTTCCTCTTCAGGAGAAGGTGGTTTGTCATTCATGGCTGTGCAACCACCTGGCTCTCAAATACAGTAA 1971 0.4191 MGSRKEEEKNEKIIRGLMKLPPNRRCINCNSLGPQYVCTSFWTFICTTCSGIHREFTHRVKSVSMAKFTSQEVDALQSGGNQRAREIYLKNWDFQRQRLPDNSNVDKIREFIKSVYVDGRYAASHGIHQDEIRRASSYHSYSQSPPYDYQYEDRKYGKQAAALTRKPGSDKARYEGKISSIIYSPGRFSDHAYDDRFANEGSGPRISDFSVSSGGEQFKSDVQSPNFYKDIKISSPSYQRRSGSSSSEDVWSQARNASLETNVNAKRDADGILPPQRTASAQSADNRFSSLRSYNSGSLVDFFSEPVQPSEPLQNKAFGIPRPPGPTRSVSMDLSKAPLESATASHAPTVDLFQSSFSSAVPFFNENQLTQASQLASVDFFANLSEEPSTVNSNEKALDFSVPKNEGWATFDVPQSTSSTAQVEIPATVPSSSKSLQEGFDPFPTSNANTQWPSFEFSSVGIHSSLTSNLWHDGVWNGEEQVSTMSANTQPWNAFEESGGHHPVDALSQGLQFHNCPTADNQILGLRESEGSKSDGVKGIAPVGGFDNHDIPSHFSGSAFPPPMLPPMGDTEPIGMKRKSTNPFDYPHESDVDHNNMFLDMSSLQDALPDTLFPTSFHSGIAESWLPKNTVTPYISSSGEGGLSFMAVQPPGSQIQ* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00608 656 ProSiteProfiles ARF GTPase-activating proteins domain profile. 11 131 IPR001164 GO:0005096
Phac4g00608 656 PANTHER ARFGAP/RECO-RELATED 1 655 IPR044820 GO:0005096
Phac4g00608 656 Pfam Putative GTPase activating protein for Arf 12 123 IPR001164 GO:0005096
Phac4g00608 656 SUPERFAMILY ArfGap/RecO-like zinc finger 10 123 IPR037278 -
Phac4g00608 656 CDD ArfGap_AGFG 11 123 - -
Phac4g00608 656 SMART arf_gap_3 11 131 IPR001164 GO:0005096
Phac4g00608 656 MobiDBLite consensus disorder prediction 233 263 - -
Phac4g00608 656 PRINTS HIV Rev interacting protein signature 42 59 IPR001164 GO:0005096
Phac4g00608 656 PRINTS HIV Rev interacting protein signature 60 81 IPR001164 GO:0005096
Phac4g00608 656 PRINTS HIV Rev interacting protein signature 23 42 IPR001164 GO:0005096
Phac4g00608 656 MobiDBLite consensus disorder prediction 428 447 - -
Phac4g00608 656 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 133 - -
Phac4g00608 656 Gene3D Arf GTPase activating protein 2 131 IPR038508 -
Phac4g00608 656 MobiDBLite consensus disorder prediction 233 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00608 Phac-Chr4 7233264 7240169 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00608 14 116 C2H2 Transcription Factor Family AT4G05330 33.333 5.20e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00608 K15044 - gmx:100788316 1073.92