Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00574 ATGGATCATTACAAGGTTCTCGGCTTGCACCGAACCGCGAGCAAAGAGGAAATCAAAACCGCTTTCAAAAAACTAGCGTTTCAGTTCCATCCGGACAAGCATTCCCAATCTCCGAGGGCGATTAGGGAAAACGCCACAATTCAATTCAAACAGGTATCGGAGGCCTACGAGGTCCTCATGGACGACCAAAAGCGCGCCGACTACAATTTCCGGCGGAGCTCGGGCGCCCGCGGCGGAAACAACCACTATTCTCAGTATAGCTACGGATACAGTAGGAGCGGGAGAAGGAACGAGTACAAACCTAGGTCTGGTGGTGGCGGCGGCTTAGCTTCCAATTTCGAAATGGCTCTTCGGATTTTGACGGCGCGGTCTTCACTGCTCTATCTAGGCTTCGCAGCTTTTTTCCTAGGGCTATATTAG 420 0.5167 MDHYKVLGLHRTASKEEIKTAFKKLAFQFHPDKHSQSPRAIRENATIQFKQVSEAYEVLMDDQKRADYNFRRSSGARGGNNHYSQYSYGYSRSGRRNEYKPRSGGGGGLASNFEMALRILTARSSLLYLGFAAFFLGLY* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00574 139 CDD DnaJ 2 61 IPR001623 -
Phac4g00574 139 PRINTS DnaJ domain signature 22 37 IPR001623 -
Phac4g00574 139 PRINTS DnaJ domain signature 64 83 IPR001623 -
Phac4g00574 139 PRINTS DnaJ domain signature 4 22 IPR001623 -
Phac4g00574 139 PRINTS DnaJ domain signature 44 64 IPR001623 -
Phac4g00574 139 SUPERFAMILY Chaperone J-domain 1 93 IPR036869 -
Phac4g00574 139 FunFam DnaJ domain protein 1 90 - -
Phac4g00574 139 Pfam DnaJ domain 2 69 IPR001623 -
Phac4g00574 139 ProSiteProfiles dnaJ domain profile. 2 72 IPR001623 -
Phac4g00574 139 PANTHER CO-CHAPERONE PROTEIN DJLA 4 99 - -
Phac4g00574 139 ProSitePatterns Nt-dnaJ domain signature. 49 68 IPR018253 -
Phac4g00574 139 Gene3D DnaJ domain 1 117 IPR036869 -
Phac4g00574 139 SMART dnaj_3 1 64 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00574 Phac-Chr4 6850185 6854844 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00574 3 73 C2H2 Transcription Factor Family AT1G74250 42.254 1.08e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00574 - - var:108343742 219.164