Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00538 ATGTTCTCTTACATTATAACATTGTACAGTGATTCAAATACAATCATCTGGGAAGCAAAAATGCAGTGTATTATTGCATTAGCAACAGGAACCATCACAAAACTTGGAGAGTCATTAGTTTCACCAATTGCAAATCAATTTGGATATCTAGTTTACTATAAAAAAAATATAAAAGATCTTAAAAATGAACTCAAAACATTGGAAGGTAGGAAACAAGGATTGCAAGGGGTGGTTGATGAAGATAAAAGGAATGGACGCCAAATTGTATCTATTGTACAAGATTGGCTCTACAAAGTGGAAAAAATCATAAATGAAGTACAAAAATCCAATGATTTTCAAGTACAAAACAATAAGTGTCTTGATATAGGGTCTCCAAATTTGGTGTCACGCTATTCATTAAGCAAGAGAGCAAAAACATTGATAATGAATGTTAAAAGATTAAATGAAGAGAAATTTGACATCATATCTTACTCTCCACCAACACCAAGACTTGGATCCACCTTCACAAATGTTATAAAAAGTTTCCCTAGTAGAAAATCAATTATTACTGAGATTTTGGAGAAATTGAAAGATGAAAATTTCAAGATACTTGGCATTTGTGGAATGGGTGGAGTTGGGAAGACAACACTTGTGAAAGAAGTAATCAAAACTCTAGATGTAAGCAAGATATTTGATGAAGTTGTAATGGCAGTTGTTTCCCAAAATCTTGATTATGTGAAAATTCAAGGTCAAATTGCAGATGCTTTAGGTTTGAGATTTGATAAGGAGACTATTCAAGGAAGAGCATGTCAACTAGGTGAAAGATTGAAAGGTATTAACAATATCCTAATAGTTCTTGATGATGTTTGGATAGACTTTGATTTTGAGTCTATTGGGATTCCTTCCGGTGAGCATCATAATAATTGTAAAATTTTGTTTACATCAAGAATTGAAGATGTTTGTTATAGGATGGGAAGTCAAAAGAATTTCGCAATTTCTGTTTTGTCTCCAGATGAAAGTTGGGATCTTTTTCATGATATGGTTGATAAAAATATTTCAACTAAGCTTGATATTTATCACATAGCAAAAGATGTTGCAAATGAATGTGGAGGTTTGCCAATTGCCATTGTAACAATGGCAAAAGCATTAGCAAATAAAGAAAAACATATATGGGAAGATGCATTGGATCAATTAAAAAACTCCTCCATCACTTCTATTTTAGGAATGCAAGCTTATGTATATTCAAGTATCAAGTTAAGTTACAATTTTTTAGATAATGAGGAAGACAAAAAAATTCTTTTCCTTTGTTGCTTATTTCCAGAAGACTTTGACATTCCTATAGAAGTTCTACTCAGGCATGGAATGGGTTTGAGATTGTTTAAAGGCATTGATGCATTGTGGAAAGTTAGAAATCGAGTGCATACCATCGTTGATAAACTTAAAAGACGTTTCATGTTGTTAGATGGTAATGTAGAAGAGTGTGTCAAAATGCATGATATTGTACGTGATGTTATCATATCAATTGCATCTACAGAAGAATGTGGTTTTGTGGTACAAGATGATGGATCTCAAATCAAACAACCTAAAGAAGAAACATGTTGCCACAACACTGCAATTTCACTTATCTTTGAAGAAGCAAAAGAATACCCTAAAATCTTAAATTGTCCAAAGCTTAAGCTTTTGCAAATAACATCAAAGAAAATGGATTTAGTTCCAGAAAATTACTTCCAATGTGTTAATAAGCTTATGGTGCTTAGTCTCCAAAATTTGCGCATTCATTCAATGTCTTTTGCATTTCAAGCTTTGGAAAACATTCACACTCTACTACTCGAAGATTGTCATGTTGGAGATATAACTATAATTGGTAAGCAACTCAAAAGGCTTGAGATTATTAGCTTTTCTAACTCAAATATCAAGCAATTGCCAGAAGAAATTGGACAACTAAAATCGCTAAGGTTATTAGATTTGACTGAATGCAACTATCTCATTCAAATATCAACTAATGTCTTGGCAAGCTTATCTAGACTAGAAGAACTCTATCTTAGAGTAAGGAATCTTTCTTTTAAGGAAAATAATCACATTCTTTTTGAGTTACAATCTTTATCTCATCATCTGAAGGTCGTAGAGATTGCAATTTTGACAAATGAAGATTTATCCAAAGATTTATTCTTCGAAAATATTGAGAGATTTTGGGTCTATCTTGGAGATTCATCTACCTTTTCTCATGGCATTGTTCGAAAAGGATACTTATACCCAAATATTTTGAAACTAAATAATGCATATTACAAATATATCAAGGGAAGTGTGACCATTCAACAATTACTTCAAAAAGTTGAAATTCTCAACTTGGTTGATATAAAAAACATGAAAAATATCATCTTGGAATTAAATGAAAGGGGTTTTCCATTTTTGAAGCATCTAAGTATCGAGTTTTGCAACAACCTTGAATATGTTGTAGATGCATTTGACGGTTGTATCTTTCCTCAACTTCTATCATTCTCTTTAAGTAATTTGGATAATTTAAAAGAGATATTCAATGTCACTAGTTACATGAGTCAAACAAATGACTTTACAAAGGCTAACTCCATCACTCCATCTCAATGCTTTGGATCCCTTACAAAACTTAAAATAGAATATTGTAACAAGTTGAAGAATATCTTCACATTGTTTCCAAGAACAATTAGTTTGGCTACACTTCAGTGTTTGCATGTGGTTGAAAGTTATGGAATTCAATACATTATCTCAAGCAATAGTAAGTATGATGGGAAATCAGTGATTGAGTTTTCAAATTTAGTAGAATTGAAGTTGCAAGAACTGCCAAACCTGATCGGGTTTTTTGAAACCAATGTTATTCATGAGAATCGTTCCTCAATAATCCAAATTCATGAATCCAATGATCAATTAATTGAAGATGTGCCTAGTTCAAAATCAAGTGTTGATCAAATTATGCCCATTGCTACTCTTTTCAGATCTAACTGGATGCAACTGTTCCCAAAGTTGGAAAAACTCTTCTTACATGCATGTTCTTCTCTAGATATGGTGTTTGATATGCAAAAATCACAATTTCATGGTGAATCACTGGTGTTCTTATTTGCTCAGTTGAAAGAAATAGAGATATCTTGGCTCACTAAGTTAAGACACATCTGGGGTAATGCTCCAAGCTACATTCAAGGTTTTCAGAATGTGAAATCAATCAAAGTTAAGAAATGTGATTCCTTAGGGTTTCTTCTAACTCCCAACATTGCAAGGGCACTTACTCAACTTCAAAAAATGGTGATACATAGCTGCCAGTCCATGGAGAAAATTGTTGGAAAAGAAGTAAACCTAAATGGTGATGATGAAGAGAAGAATGTGGAAACCCTAGTGTTTGGTCAATTAGAATCTTTAACACTTGTTGATCTCCCAAAACTTATGAGTATTTGTCCAGATTCCTATGAAATAATGTGGCCATCTTTGAGATTTTTATGCATTGATGGATGCCCTCAGCTTATTATGGCATCTGCCATGGCAAGGCAAGAAAATTTCAATGCCTCATCAAGTTGTTCAACATGTGATGCTGCAAATAGTACTTCTAAAGAGGATTCACCAAGGTTTTCTCATTGTTTCCTTGGATGCACCCCACATGTATTTTCCAACTTCAAGTTTAAGCATTCATCAACAGAGAAAGATGTCCCTTCTGTCAGCAATATATATTCCAAAGCAGAAACAGTATCCCCCATTCCAGTTTTGGAACAAATGCAAGTAAAAGGATGGGATTCACTACAAGTCTTGTTCCTTCTCAAACAAAACCAACTTTCTGATGACACCAATGCCAATTGTCTAGTGAAGTTGACACTTGCACAAACACCTAAAAATCCAGCAGAAATCACTGCATTCAACAACCTCACTGTGTTAACTATAGATTCTTGTCACAAGTTGAGGTATCTGTTCCCATATTCCATAGCAAAGCTCCTTGTGAAACTGCAAGAAATAAAAATGTCAAACTGTAAGGTGGTAAAGCAACTAGTCCAAAGAGAAGGAGAAGATAGCTTAACTCTATCTCTTCCTCAATCAAGTTCTCTCAGAGTACAGGAAAATTCCTCATCTAGTGACTGTGCTATCTCTTCCCAAGAGGCATGTGCCTTAGAGTGGTCATCTTTGAAGAGAATTAGCATATCTCACTGTGGGGTGCTAGAAGTTGTTATTGGTGAAATAGGGGAGAAAATAGATACCATAGTTGCTTCATTTGCTCAGCTGCAATCTCTTACATTGAGCCATCTACCAAATGCTGTAAGCTTTTGTCTCACACCTTGTGCATCAGAATCACCATTTGAGAACATCCATGAGGCAACAAGTAATGAAGAAATCAGAATTATGAGAGTTGATCCACTTATAAATGGCTTCATTTTTCCTAATCTAACATATCTAGCAATTTCTAGCTGCAACAAAGTTAGCTGTTTGTTCTCTCCTTCAACATCAACTAGCTTTGTGCGGTTGGTAGAGCTAGATATATCTGGCTGTAGGGAGATAGAGGAAATAGTGTCTACAGAAGAAACACAAGGGAATGTGACTAAGATTGTGTTCCACAGCTTGCAACGTCTAAAACTTGAAAACCTACCAAAACTCAAGGCCTTCTGCCAGGGTTCCTATGGCTTTGATTTTCCATCATTGCATGAAGTATTGGTGAAAAATTGCCACATGATGGACACATTCTCTCATGAGCCTTCATACAGTCCAAAGTTGGAAGGAGTCATCATGGAAATTGGAAGCATAACCAAGAACATGTGGATGGGAGATCTGAATGCTACTGTACCACTTTGCAAAGGACTTTTGGCTTTTCAAACATCAGAGACACTTGAATGGATCAAGCAGGATAAATGCATACAAAGATACTTCACCGAAGAAAAACACTTGACAGTTGAAGGTTTTCAAAGGCTGCTAAAACTAGTTCCCTCTAATGTGATACACATATTTCAAAATCTAAAGGAAATCACCATAAAAGATTGTGGTTCACTGGTTGAGGTCTTTGAATCACATGGTGTGGATGCAAAGGAAATGCATGCCATGATACAGTACAAGCTAGAAGCATTGAATTTGTATTTTCTACCAAAACTGATCCACCTATGGAAAAACTATGGTGGAGTTGTGGCATTCCAGAAGCTTAGAATACTAAAAGTACACCACTGTGGCAACTTGTGTAGTTTGTTCTCTCCATCAATAGCCAGAAGTCTAGTGCAACTTAGGCACCTACGAGTTCATAGTTGCCACATGATGGAGGAAATAATTACTAAAGATGAGGAATCAGAAGGATCAAATAACGCTAAGATTGTATTTCCACTTTTGAACAAGCTGGAGCTTCGTTATGTTCCCAACCTCAAATGTTTCTGCTCCGGAACTTTCAATATTGATCTTCCATCTTGTGAAGAAATGATAATTGAAAAATGTCCAAATATGACTACCTTTTGCTATGCATCAGTAACCACAGCAAAGCTTCCCCATATATATAAAGGTTCATATGAGTATGTTGACATAATGGGAGACCTTAATATGACCATCCATCATGCCAATGAGAGTTTGAAGGTTGCACTAGAAACATCAGAGACAATCACATGCATTGAGCATGGCCAAAAGCTGCTGCCTTACTTAAGAAGTGATACAGAATTGGTCGTTGAAGGTAGTGAAAAACTGTTGCATTGTATTCCATCCAACATGCTGCATAGGTTCCAGCATCTAAAACAACTAAAGGTACATGATTGCGCTTCAGTAGTTGAGATATTTGAATCGGGGGGAGTGGATGAAAATGAAGACGAAGGGTGTACCAGAGCACCGTACAATTTTAATCTACAGGAACTGCATCTGTATGATCTTCCTAAACTGATGCACATATGGAAATATCATGGTGAAATCCTGAGCTTTACGAACCTTAAAAAGCTAAAGATTCAGCACTGTCCTAGTTTGAAAAATGTGCTTTCTCCTTCCATGGCCAGAAGCCTTTCACAACTCCAAGAGCTTTCAGTATATGAATGTGAGTTGATAGAAGAGATCATCACTAGAGATGAGAAACCATCTGAAGAACCAAGCAGGGTGAAGATTATATTCCCGGCATTGCAATGGTTAACCCTTTACCGGCTTCCGTGCCTTAGATGTTTCTGTTCAAGCACTTACCACTTTGAGCTGCCATCCTGCCATGACATAACCATTACAGAATGTCCTAAGATGGAGGCTTGCCATGGAAACAGAGGCACCTCAGAACTTCCTTTTGTCTCCATTAAGACAAATGATATCAGGGCAGAAGAGAGATCTAAATAA 6267 0.3577 MFSYIITLYSDSNTIIWEAKMQCIIALATGTITKLGESLVSPIANQFGYLVYYKKNIKDLKNELKTLEGRKQGLQGVVDEDKRNGRQIVSIVQDWLYKVEKIINEVQKSNDFQVQNNKCLDIGSPNLVSRYSLSKRAKTLIMNVKRLNEEKFDIISYSPPTPRLGSTFTNVIKSFPSRKSIITEILEKLKDENFKILGICGMGGVGKTTLVKEVIKTLDVSKIFDEVVMAVVSQNLDYVKIQGQIADALGLRFDKETIQGRACQLGERLKGINNILIVLDDVWIDFDFESIGIPSGEHHNNCKILFTSRIEDVCYRMGSQKNFAISVLSPDESWDLFHDMVDKNISTKLDIYHIAKDVANECGGLPIAIVTMAKALANKEKHIWEDALDQLKNSSITSILGMQAYVYSSIKLSYNFLDNEEDKKILFLCCLFPEDFDIPIEVLLRHGMGLRLFKGIDALWKVRNRVHTIVDKLKRRFMLLDGNVEECVKMHDIVRDVIISIASTEECGFVVQDDGSQIKQPKEETCCHNTAISLIFEEAKEYPKILNCPKLKLLQITSKKMDLVPENYFQCVNKLMVLSLQNLRIHSMSFAFQALENIHTLLLEDCHVGDITIIGKQLKRLEIISFSNSNIKQLPEEIGQLKSLRLLDLTECNYLIQISTNVLASLSRLEELYLRVRNLSFKENNHILFELQSLSHHLKVVEIAILTNEDLSKDLFFENIERFWVYLGDSSTFSHGIVRKGYLYPNILKLNNAYYKYIKGSVTIQQLLQKVEILNLVDIKNMKNIILELNERGFPFLKHLSIEFCNNLEYVVDAFDGCIFPQLLSFSLSNLDNLKEIFNVTSYMSQTNDFTKANSITPSQCFGSLTKLKIEYCNKLKNIFTLFPRTISLATLQCLHVVESYGIQYIISSNSKYDGKSVIEFSNLVELKLQELPNLIGFFETNVIHENRSSIIQIHESNDQLIEDVPSSKSSVDQIMPIATLFRSNWMQLFPKLEKLFLHACSSLDMVFDMQKSQFHGESLVFLFAQLKEIEISWLTKLRHIWGNAPSYIQGFQNVKSIKVKKCDSLGFLLTPNIARALTQLQKMVIHSCQSMEKIVGKEVNLNGDDEEKNVETLVFGQLESLTLVDLPKLMSICPDSYEIMWPSLRFLCIDGCPQLIMASAMARQENFNASSSCSTCDAANSTSKEDSPRFSHCFLGCTPHVFSNFKFKHSSTEKDVPSVSNIYSKAETVSPIPVLEQMQVKGWDSLQVLFLLKQNQLSDDTNANCLVKLTLAQTPKNPAEITAFNNLTVLTIDSCHKLRYLFPYSIAKLLVKLQEIKMSNCKVVKQLVQREGEDSLTLSLPQSSSLRVQENSSSSDCAISSQEACALEWSSLKRISISHCGVLEVVIGEIGEKIDTIVASFAQLQSLTLSHLPNAVSFCLTPCASESPFENIHEATSNEEIRIMRVDPLINGFIFPNLTYLAISSCNKVSCLFSPSTSTSFVRLVELDISGCREIEEIVSTEETQGNVTKIVFHSLQRLKLENLPKLKAFCQGSYGFDFPSLHEVLVKNCHMMDTFSHEPSYSPKLEGVIMEIGSITKNMWMGDLNATVPLCKGLLAFQTSETLEWIKQDKCIQRYFTEEKHLTVEGFQRLLKLVPSNVIHIFQNLKEITIKDCGSLVEVFESHGVDAKEMHAMIQYKLEALNLYFLPKLIHLWKNYGGVVAFQKLRILKVHHCGNLCSLFSPSIARSLVQLRHLRVHSCHMMEEIITKDEESEGSNNAKIVFPLLNKLELRYVPNLKCFCSGTFNIDLPSCEEMIIEKCPNMTTFCYASVTTAKLPHIYKGSYEYVDIMGDLNMTIHHANESLKVALETSETITCIEHGQKLLPYLRSDTELVVEGSEKLLHCIPSNMLHRFQHLKQLKVHDCASVVEIFESGGVDENEDEGCTRAPYNFNLQELHLYDLPKLMHIWKYHGEILSFTNLKKLKIQHCPSLKNVLSPSMARSLSQLQELSVYECELIEEIITRDEKPSEEPSRVKIIFPALQWLTLYRLPCLRCFCSSTYHFELPSCHDITITECPKMEACHGNRGTSELPFVSIKTNDIRAEERSK* 2089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00538 2088 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1346 1562 - -
Phac4g00538 2088 SUPERFAMILY L domain-like 487 840 - -
Phac4g00538 2088 SUPERFAMILY RNI-like 1451 1748 - -
Phac4g00538 2088 FunFam Probable disease resistance protein At1g61300 167 322 - -
Phac4g00538 2088 Gene3D - 165 326 IPR027417 -
Phac4g00538 2088 Coils Coil 374 394 - -
Phac4g00538 2088 Gene3D - 327 409 IPR042197 -
Phac4g00538 2088 Coils Coil 50 77 - -
Phac4g00538 2088 Gene3D Ribonuclease Inhibitor 747 947 IPR032675 -
Phac4g00538 2088 Gene3D Ribonuclease Inhibitor 1236 1581 IPR032675 -
Phac4g00538 2088 Pfam NB-ARC domain 181 415 IPR002182 GO:0043531
Phac4g00538 2088 Gene3D Ribonuclease Inhibitor 523 721 IPR032675 -
Phac4g00538 2088 Gene3D Ribonuclease Inhibitor 1868 2072 IPR032675 -
Phac4g00538 2088 Gene3D Ribonuclease Inhibitor 1622 1817 IPR032675 -
Phac4g00538 2088 Gene3D Ribonuclease Inhibitor 984 1172 IPR032675 -
Phac4g00538 2088 SUPERFAMILY L domain-like 1045 1556 - -
Phac4g00538 2088 SUPERFAMILY RNI-like 1691 2003 - -
Phac4g00538 2088 Gene3D - 410 500 IPR036388 -
Phac4g00538 2088 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 429 IPR027417 -
Phac4g00538 2088 PRINTS Disease resistance protein signature 196 211 - -
Phac4g00538 2088 PRINTS Disease resistance protein signature 269 283 - -
Phac4g00538 2088 PRINTS Disease resistance protein signature 639 655 - -
Phac4g00538 2088 PRINTS Disease resistance protein signature 362 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00538 Phac-Chr4 6322078 6336734 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00538 193 505 WRKY Transcription Factor Family AT5G45050 25.994 4.83e-06 50.1