Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00537 ATGCAGTGTATTATTGCATTAGCAACAGGAACCATCACAAAACTTGGAGAGTCATTAGTTTCACCAATTGCAAATCAATTTGGATATCTAGTTTACTATAAAAAAAATATAAAAGATCTTAAAAATGAACTCAAAACATTGGAAGGTAGGAAACAAGGATTGCAAGGGGTGGTTGATGAAGATAAAAGGAATGGACGCCAAATTGTATCTATTGTACAAGATTGGCTCTACAAAGTGGAAAAAATCATAAATGAAGTACAAAAATCCAATGATTTTCAAGTACAAAACAATAAGTGTCTTGATATAGGGTCTCCAAATTTGGTGTCACGCTATTCATTAAGCAAGAGAGCAAAAACATTGATAATGAATGTTAAAAGATTAAATGAAGAGAAATTTGACATCATATCTTACTCTCCACCAACACCAAGACTTGGATCCACCTTCACAAATGTTATAAAAAGTTTCCCTAGTAGAAAATCAATTATTACTGAGATTTTGGAGAAATTGAAAGATGAAAATTTCAAGATACTTGGCATTTGTGGAATGGGTGGAGTTGGGAAGACAACACTTGTGAAAGAAGTAATCAAAACTCTAGATGTAAGCAAGATATTTGATGAAGTTGTAATGGCAGTTGTTTCCCAAAATCTTGATTATGTGAAAATTCAAGGTCAAATTGCAGATGCTTTAGGTTTGAGATTTGATAAGGAGACTATTCAAGGAAGAGCATGTCAACTAGGTGAAAGATTGAAAGGTATTAACAATATCCTAATAGTTCTTGATGATGTTTGGATAGACTTTGATTTTGAGTCTATTGGGATTCCTTCCGGTGAGCATCATAATAATTGTAAAATTTTGTTTACATCAAGAATTGAAGATGTTTGTTATAGGATGGGAAGTCAAAAGAATTTCGCAATTTCTGTTTTGTCTCCAGATGAAAGTTGGGATCTTTTTCATGATATGGTTGATAAAAATATTTCAACTAAGCTTGATATTTATCACATAGCAAAAGATGTTGCAAATGAATGTGGAGGTTTGCCAATTGCCATTGTAACAATGGCAAAAGCATTAGCAAATAAAGAAAAACATATATGGGAAGATGCATTGGATCAATTAAAAAACTCCTCCATCACTTCTATTTTAGGAATGCAAGCTTATGTATATTCAAGTATCAAGTTAAGTTACAATTTTTTAGATAATGAGGAAGACAAAAAAATTCTTTTCCTTTGTTGCTTATTTCCAGAAGACTTTGACATTCCTATAGAAGTTCTACTCAGGCATGGAATGGGTTTGAGATTGTTTAAAGGCATTGATGCATTGTGGAAAGTTAGAAATCGAGTGCATACCATCGTTGATAAACTTAAAAGACGTTTCATGTTGTTAGATGGTAATGTAGAAGAGTGTGTCAAAATGCATGATATTGTACGTGATGTTATCATATCAATTGCATCTACAGAAGAATGTGGTTTTGTGGTACAAGATGATGGATCTCAAATCAAACAACCTAAAGAAGAAACATGTTGCCACAACACTGCAATTTCACTTATCTTTGAAGAAGCAAAAGAATACCCTAAAATCTTAAATTGTCCAAAGCTTAAGCTTTTGCAAATAACATCAAAGAAAATGGATTTAGTTCCAGAAAATTACTTCCAATGTGTTAATAAGCTTATGGTGCTTAGTCTCCAAAATTTGCGCATTCATTCAATGTCTTTTGCATTTCAAGCTTTGGAAAACATTCACACTCTACTACTCGAAGATTGTCATGTTGGAGATATAACTATAATTGGTAAGCAACTCAAAAGGCTTGAGATTATTAGCTTTTCTAACTCAAATATCAAGCAATTGCCAGAAGAAATTGGACAACTAAAATCGCTAAGGTTATTAGATTTGACTGAATGCAACTATCTCATTCAAATATCAACTAATGTCTTGGCAAGCTTATCTAGACTAGAAGAACTCTATCTTAGAGTAAGGAATCTTTCTTTTAAGGAAAATAATCACATTCTTTTTGAGTTACAATCTTTATCTCATCATCTGAAGGTCGTAGAGATTGCAATTTTGACAAATGAAGATTTATCCAAAGATTTATTCTTCGAAAATATTGAGAGATTTTGGGTCTATCTTGGAGATTCATCTACCTTTTCTCATGGCATTGTTCGAAAAGGATACTTATACCCAAATATTTTGAAACTAAATAATGCATATTACAAATATATCAAGGGAAGTGTGACCATTCAACAATTACTTCAAAAAGTTGAAATTCTCAACTTGGTTGATATAAAAAACATGAAAAATATCATCTTGGAATTAAATGAAAGGGGTTTTCCATTTTTGAAGCATCTAAGTATCGAGTTTTGCAACAACCTTGAATATGTTGTAGATGCATTTGACGGTTGTATCTTTCCTCAACTTCTATCATTCTCTTTAAGTAATTTGGATAATTTAAAAGAGATATTCAATGTCACTAGTTACATGAGTCAAACAAATGACTTTACAAAGGCTAACTCCATCACTCCATCTCAATGCTTTGGATCCCTTACAAAACTTAAAATAGAATATTGTAACAAGTTGAAGAATATCTTCACATTGTTTCCAAGAACAATTAGTTTGGCTACACTTCAGTGTTTGCATGTGGTTGAAAGTTATGGAATTCAATACATTATCTCAAGCAATAGTAAGTATGATGGGAAATCAGTGATTGAGTTTTCAAATTTAGTAGAATTGAAGTTGCAAGAACTGCCAAACCTGATCGGGTTTTTTGAAACCAATGTTATTCATGAGAATCGTTCCTCAATAATCCAAATTCATGAATCCAATGATCAATTAATTGAAGATGTGCCTAGTTCAAAATCAAGTGTTGATCAAATTATGCCCATTGCTACTCTTTTCAGATCTAACTGGATGCAACTGTTCCCAAAGTTGGAAAAACTCTTCTTACATGCATGTTCTTCTCTAGATATGGTGTTTGATATGCAAAAATCACAATTTCATGGTGAATCACTGGTGTTCTTATTTGCTCAGTTGAAAGAAATAGAGATATCTTGGCTCACTAAGTTAAGACACATCTGGGGTAATGCTCCAAGCTACATTCAAGGTTTTCAGAATGTGAAATCAATCAAAGTTAAGAAATGTGATTCCTTAGGGTTTCTTCTAACTCCCAACATTGCAAGGGCACTTACTCAACTTCAAAAAATGGTGATACATAGCTGCCAGTCCATGGAGAAAATTGTTGGAAAAGAAGTAAACCTAAATGGTGATGATGAAGAGAAGAATGTGGAAACCCTAGTGTTTGGTCAATTAGAATCTTTAACACTTGTTGATCTCCCAAAACTTATGAGTATTTGTCCAGATTCCTATGAAATAATGTGGCCATCTTTGAGATTTTTATGCATTGATGGATGCCCTCAGCTTATTATGGCATCTGCCATGGCAAGGCAAGAAAATTTCAATGCCTCATCAAGTTGTTCAACATGTGATGCTGCAAATAGTACTTCTAAAGAGGATTCACCAAGGTTTTCTCATTGTTTCCTTGGATGCACCCCACATGTATTTTCCAACTTCAAGTTTAAGCATTCATCAACAGAGAAAGATGTCCCTTCTGTCAGCAATATATATTCCAAAGCAGAAACAGTATCCCCCATTCCAGTTTTGGAACAAATGCAAGTAAAAGGATGGGATTCACTACAAGTCTTGTTCCTTCTCAAACAAAACCAACTTTCTGATGACACCAATGCCAATTGTCTAGTGAAGTTGACACTTGCACAAACACCTAAAAATCCAGCAGAAATCACTGCATTCAACAACCTCACTGTGTTAACTATAGATTCTTGTCACAAGTTGAGGTATCTGTTCCCATATTCCATAGCAAAGCTCCTTGTGAAACTGCAAGAAATAAAAATGTCAAACTGTAAGGTGGTAAAGCAACTAGTCCAAAGAGAAGGAGAAGATAGCTTAACTCTATCTCTTCCTCAATCAAGTTCTCTCAGAGTACAGGAAAATTCCTCATCTAGTGACTGTGCTATCTCTTCCCAAGAGGCATGTGCCTTAGAGTGGTCATCTTTGAAGAGAATTAGCATATCTCACTGTGGGGTGCTAGAAGTTGTTATTGGTGAAATAGGGGAGAAAATAGATACCATAGTTGCTTCATTTGCTCAGCTGCAATCTCTTACATTGAGCCATCTACCAAATGCTGTAAGCTTTTGTCTCACACCTTGTGCATCAGAATCACCATTTGAGAACATCCATGAGGCAACAAGTAATGAAGAAATCAGAATTATGAGAGTTGATCCACTTATAAATGGCTTCATTTTTCCTAATCTAACATATCTAGCAATTTCTAGCTGCAACAAAGTTAGCTGTTTGTTCTCTCCTTCAACATCAACTAGCTTTGTGCGGTTGGTAGAGCTAGATATATCTGGCTGTAGGGAGATAGAGGAAATAGTGTCTACAGAAGAAACACAAGGGAATGTGACTAAGATTGTGTTCCACAGCTTGCAACGTCTAAAACTTGAAAACCTACCAAAACTCAAGGCCTTCTGCCAGGGTTCCTATGGCTTTGATTTTCCATCATTGCATGAAGTATTGGTGAAAAATTGCCACATGATGGACACATTCTCTCATGAGCCTTCATACAGTCCAAAGTTGGAAGGAGTCATCATGGAAATTGGAAGCATAACCAAGAACATGTGGATGGGAGATCTGAATGCTACTGTACCACTTTGCAAAGGACTTTTGGCTTTTCAAACATCAGAGACACTTGAATGGATCAAGCAGGATAAATGCATACAAAGATACTTCACCGAAGAAAAACACTTGACAGTTGAAGGTTTTCAAAGGCTGCTAAAACTAGTTCCCTCTAATGTGATACACATATTTCAAAATCTAAAGGAAATCACCATAAAAGATTGTGGTTCACTGGTTGAGGTCTTTGAATCACATGGTGTGGATGCAAAGGAAATGCATGCCATGATACAGTACAAGCTAGAAGCATTGAATTTGTATTTTCTACCAAAACTGATCCACCTATGGAAAAACTATGGTGGAGTTGTGGCATTCCAGAAGCTTAGAATACTAAAAGTACACCACTGTGGCAACTTGTGTAGTTTGTTCTCTCCATCAATAGCCAGAAGTCTAGTGCAACTTAGGCACCTACGAGTTCATAGTTGCCACATGATGGAGGAAATAATTACTAAAGATGAGGAATCAGAAGGATCAAATAACGCTAAGATTGTATTTCCACTTTTGAACAAGCTGGAGCTTCGTTATGTTCCCAACCTCAAATGTTTCTGCTCCGGAACTTTCAATATTGATCTTCCATCTTGTGAAGAAATGATAATTGAAAAATGTCCAAATATGACTACCTTTTGCTATGCATCAGTAACCACAGCAAAGCTTCCCCATATATATAAAGGTTCATATGAGTATGTTGACATAATGGGAGACCTTAATATGACCATCCATCATGCCAATGAGAGTTTGAAGGTTGCACTAGAAACATCAGAGACAATCACATGCATTGAGCATGGCCAAAAGCTGCTGCCTTACTTAAGAAGTGATACAGAATTGGTCGTTGAAGGTAGTGAAAAACTGTTGCATTGTATTCCATCCAACATGCTGCATAGGTTCCAGCATCTAAAACAACTAAAGGTACATGATTGCGCTTCAGTAGTTGAGATATTTGAATCGGGGGGAGTGGATGAAAATGAAGACGAAGGGTGTACCAGAGCACCGTACAATTTTAATCTACAGGAACTGCATCTGTATGATCTTCCTAAACTGATGCACATATGGAAATATCATGGTGAAATCCTGAGCTTTACGAACCTTAAAAAGCTAAAGATTCAGCACTGTCCTAGTTTGAAAAATGTGCTTTCTCCTTCCATGGCCAGAAGCCTTTCACAACTCCAAGAGCTTTCAGTATATGAATGTGAGTTGATAGAAGAGATCATCACTAGAGATGAGAAACCATCTGAAGAACCAAGCAGGGTGAAGATTATATTCCCGGCATTGCAATGGTTAACCCTTTACCGGCTTCCGTGCCTTAGATGTTTCTGTTCAAGCACTTACCACTTTGAGCTGCCATCCTGCCATGACATAACCATTACAGAATGTCCTAAGATGGAGGCTTGCCATGGAAACAGAGGCACCTCAGAACTTCCTTTTGTCTCCATTAAGACAAATGATATCAGGGCAGAAGAGAGATCTAAATAA 6207 0.3583 MQCIIALATGTITKLGESLVSPIANQFGYLVYYKKNIKDLKNELKTLEGRKQGLQGVVDEDKRNGRQIVSIVQDWLYKVEKIINEVQKSNDFQVQNNKCLDIGSPNLVSRYSLSKRAKTLIMNVKRLNEEKFDIISYSPPTPRLGSTFTNVIKSFPSRKSIITEILEKLKDENFKILGICGMGGVGKTTLVKEVIKTLDVSKIFDEVVMAVVSQNLDYVKIQGQIADALGLRFDKETIQGRACQLGERLKGINNILIVLDDVWIDFDFESIGIPSGEHHNNCKILFTSRIEDVCYRMGSQKNFAISVLSPDESWDLFHDMVDKNISTKLDIYHIAKDVANECGGLPIAIVTMAKALANKEKHIWEDALDQLKNSSITSILGMQAYVYSSIKLSYNFLDNEEDKKILFLCCLFPEDFDIPIEVLLRHGMGLRLFKGIDALWKVRNRVHTIVDKLKRRFMLLDGNVEECVKMHDIVRDVIISIASTEECGFVVQDDGSQIKQPKEETCCHNTAISLIFEEAKEYPKILNCPKLKLLQITSKKMDLVPENYFQCVNKLMVLSLQNLRIHSMSFAFQALENIHTLLLEDCHVGDITIIGKQLKRLEIISFSNSNIKQLPEEIGQLKSLRLLDLTECNYLIQISTNVLASLSRLEELYLRVRNLSFKENNHILFELQSLSHHLKVVEIAILTNEDLSKDLFFENIERFWVYLGDSSTFSHGIVRKGYLYPNILKLNNAYYKYIKGSVTIQQLLQKVEILNLVDIKNMKNIILELNERGFPFLKHLSIEFCNNLEYVVDAFDGCIFPQLLSFSLSNLDNLKEIFNVTSYMSQTNDFTKANSITPSQCFGSLTKLKIEYCNKLKNIFTLFPRTISLATLQCLHVVESYGIQYIISSNSKYDGKSVIEFSNLVELKLQELPNLIGFFETNVIHENRSSIIQIHESNDQLIEDVPSSKSSVDQIMPIATLFRSNWMQLFPKLEKLFLHACSSLDMVFDMQKSQFHGESLVFLFAQLKEIEISWLTKLRHIWGNAPSYIQGFQNVKSIKVKKCDSLGFLLTPNIARALTQLQKMVIHSCQSMEKIVGKEVNLNGDDEEKNVETLVFGQLESLTLVDLPKLMSICPDSYEIMWPSLRFLCIDGCPQLIMASAMARQENFNASSSCSTCDAANSTSKEDSPRFSHCFLGCTPHVFSNFKFKHSSTEKDVPSVSNIYSKAETVSPIPVLEQMQVKGWDSLQVLFLLKQNQLSDDTNANCLVKLTLAQTPKNPAEITAFNNLTVLTIDSCHKLRYLFPYSIAKLLVKLQEIKMSNCKVVKQLVQREGEDSLTLSLPQSSSLRVQENSSSSDCAISSQEACALEWSSLKRISISHCGVLEVVIGEIGEKIDTIVASFAQLQSLTLSHLPNAVSFCLTPCASESPFENIHEATSNEEIRIMRVDPLINGFIFPNLTYLAISSCNKVSCLFSPSTSTSFVRLVELDISGCREIEEIVSTEETQGNVTKIVFHSLQRLKLENLPKLKAFCQGSYGFDFPSLHEVLVKNCHMMDTFSHEPSYSPKLEGVIMEIGSITKNMWMGDLNATVPLCKGLLAFQTSETLEWIKQDKCIQRYFTEEKHLTVEGFQRLLKLVPSNVIHIFQNLKEITIKDCGSLVEVFESHGVDAKEMHAMIQYKLEALNLYFLPKLIHLWKNYGGVVAFQKLRILKVHHCGNLCSLFSPSIARSLVQLRHLRVHSCHMMEEIITKDEESEGSNNAKIVFPLLNKLELRYVPNLKCFCSGTFNIDLPSCEEMIIEKCPNMTTFCYASVTTAKLPHIYKGSYEYVDIMGDLNMTIHHANESLKVALETSETITCIEHGQKLLPYLRSDTELVVEGSEKLLHCIPSNMLHRFQHLKQLKVHDCASVVEIFESGGVDENEDEGCTRAPYNFNLQELHLYDLPKLMHIWKYHGEILSFTNLKKLKIQHCPSLKNVLSPSMARSLSQLQELSVYECELIEEIITRDEKPSEEPSRVKIIFPALQWLTLYRLPCLRCFCSSTYHFELPSCHDITITECPKMEACHGNRGTSELPFVSIKTNDIRAEERSK* 2069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00537 2068 FunFam Probable disease resistance protein At1g61300 147 302 - -
Phac4g00537 2068 Gene3D Ribonuclease Inhibitor 503 701 IPR032675 -
Phac4g00537 2068 Pfam NB-ARC domain 161 395 IPR002182 GO:0043531
Phac4g00537 2068 SUPERFAMILY L domain-like 467 820 - -
Phac4g00537 2068 PRINTS Disease resistance protein signature 342 356 - -
Phac4g00537 2068 PRINTS Disease resistance protein signature 176 191 - -
Phac4g00537 2068 PRINTS Disease resistance protein signature 619 635 - -
Phac4g00537 2068 PRINTS Disease resistance protein signature 249 263 - -
Phac4g00537 2068 SUPERFAMILY L domain-like 1848 2040 - -
Phac4g00537 2068 Gene3D - 307 389 IPR042197 -
Phac4g00537 2068 SUPERFAMILY RNI-like 1430 1983 - -
Phac4g00537 2068 Coils Coil 354 374 - -
Phac4g00537 2068 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1326 1542 - -
Phac4g00537 2068 SUPERFAMILY RNI-like 1226 1533 - -
Phac4g00537 2068 SUPERFAMILY RNI-like 1005 1137 - -
Phac4g00537 2068 Coils Coil 30 57 - -
Phac4g00537 2068 Gene3D - 145 306 IPR027417 -
Phac4g00537 2068 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 409 IPR027417 -
Phac4g00537 2068 Gene3D - 390 480 IPR036388 -
Phac4g00537 2068 Gene3D Ribonuclease Inhibitor 727 918 IPR032675 -
Phac4g00537 2068 Gene3D Ribonuclease Inhibitor 1423 1553 IPR032675 -
Phac4g00537 2068 Gene3D Ribonuclease Inhibitor 1217 1422 IPR032675 -
Phac4g00537 2068 Gene3D Ribonuclease Inhibitor 964 1152 IPR032675 -
Phac4g00537 2068 Gene3D Ribonuclease Inhibitor 1848 2052 IPR032675 -
Phac4g00537 2068 Gene3D Ribonuclease Inhibitor 1598 1797 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00537 Phac-Chr4 6320836 6336985 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00537 173 485 WRKY Transcription Factor Family AT5G45050 25.994 4.54e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00537 - - vra:106757704 3496.44