Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00523 ATGGGAAAGCCAAGAGGAAGAGAAGCTGCTATTTCTTTAGTGGTTTTCTTCTGGTTTTGGAGCTCTTCAAATGCTTTGCTTTCTCCAAAGGGAGTAAACTTTGAAGTGCAAGCTTTAATGGGCATGAAAGCTTTTCTTGTGGATCCCCATGGTATTCTAGATAATTGGGACGGGGATGCAGTTGATCCATGCAGCTGGAATATGGTCACGTGTTCCCCTGAGAATCTTGTTATTAGCCTGGGCATTCCCAGTCAAAATTTATCTGGTATTCTATCTCCAAGCATAGGAAACCTGACATATCTTCAGACTGTGGTGCTACAAAATAACAACATAACTGGACCAATCCCTTCAGAGATAGGAAAACTTTCCAAGCTTCAAACTCTTGATCTCTCTGACAACTTCTTCAATGGGGAGATTCCTCCCTCTCTGGGTCACCTGAGAAGCCTACAGTACTTGAGGCTTAATAATAACAGTTTTGATGGAGAATGCCCAGTGTCACTTGCTAACATGGCGCAGCTTGCTTTTCTTGACTTGTCCTACAATAATCTGAGTGGCCCTATTCCTAGAATTTTGGCCAAATCGTTCAGTATTGTAGGAAACCCTTTAGTCTGCACCACTGAAAAAGAAAAAAATTGCCATGGGATGACACTTATGCCCATGTCAATGAACTTGAACAATTCTGAGAATGCTTTACCATCTGGTAGAACAAAGGCTCACAGAATGGTCATTGCCTTTGGTCTGAGTCTTGGATGCCTCTGCTTGATAGTTTTTGGTCTTGGATTTATTCTATGGAGGAGGCACAAGCGTAAACAACAGTCATTCTTTGATGTTAAAGACCAGCATCATGAAGAAGTCTACCTTGGAAACTTGAAGAGGTTCCAATTAAGAGAACTCCAGATTGCTACTAACAACTTCAGCAACAAAAACATTCTCGGCAAGGGTGGTTTTGGAAATGTCTACAAGGGAATTCTCCCAGATGGCACTCTCGTGGCAGTCAAGAGGCTTAAAGATGGCAGTGCCACTGGAGGAGATATTCAATTTCAGACTGAAGTTGAAATGATCAGCTTGGCGGTGCACCGAAACCTCCTCAAACTGTATGGATTTTGCATGACACCAACAGAAAGGCTTTTGGTTTATCCTTACATGTCCAATGGCAGTGTTGCTTCTAGGCTCAAGGGTAAGCCAGTGTTGGATTGGGGCACAAGAAAGCAAATTTCCATAGGAGCAGCAAGGGGACTGCTATACCTTCATGAGCAGTGTGATCCAAAGATAATCCACAGAGATGTGAAGGCTGCAAATATATTGCTTGATGACTATTGTGAGGCAGTGGTAGGGGATTTTGGGTTGGCAAAGCTTTTAGATCATCAAGATTCACATGTTACAACTGCAGTGAGGGGCACAGTGGGGCATATAGCACCAGAGTATCTTTCCACAGGGCAATCTTCTGAGAAAACTGACGTCTTTGGATTTGGCATTCTGCTTCTTGAATTGATCACAGGCCAGAGGGCACTGGAATTTGGAAAAGCAGCCAACCAAAAAGGAGCCATGCTTGATTGGGTAAGGAAAATCCATCAAGAGAAGAAGCTTGAGTTGCTTGTGGACAAGGATCTCATGAACAACTATGACAGGATTGAGCTTGAGGAAATTGTTCAAGTGGCACTCTTGTGCACACAGTATCTTCCTGGCCATAGGCCCCGAATGTCTGAAGTTGTACGCATGCTTGAAGGTGATGGCCTTGCAGAGAAATGGGAGGCTTCTCAAAGTGCTGACACCAACAAATGCAACAAACCACATGAACTCTCTTCATCAGATAGGTATTCTGACCTCACTGATGACTCTTCTTTGTTGGTTCAAGCAATGGAACTCTCAGGCCCCAGATGA 1881 0.437 MGKPRGREAAISLVVFFWFWSSSNALLSPKGVNFEVQALMGMKAFLVDPHGILDNWDGDAVDPCSWNMVTCSPENLVISLGIPSQNLSGILSPSIGNLTYLQTVVLQNNNITGPIPSEIGKLSKLQTLDLSDNFFNGEIPPSLGHLRSLQYLRLNNNSFDGECPVSLANMAQLAFLDLSYNNLSGPIPRILAKSFSIVGNPLVCTTEKEKNCHGMTLMPMSMNLNNSENALPSGRTKAHRMVIAFGLSLGCLCLIVFGLGFILWRRHKRKQQSFFDVKDQHHEEVYLGNLKRFQLRELQIATNNFSNKNILGKGGFGNVYKGILPDGTLVAVKRLKDGSATGGDIQFQTEVEMISLAVHRNLLKLYGFCMTPTERLLVYPYMSNGSVASRLKGKPVLDWGTRKQISIGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAANQKGAMLDWVRKIHQEKKLELLVDKDLMNNYDRIELEEIVQVALLCTQYLPGHRPRMSEVVRMLEGDGLAEKWEASQSADTNKCNKPHELSSSDRYSDLTDDSSLLVQAMELSGPR* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00523 626 FunFam Somatic embryogenesis receptor kinase 1 274 381 - -
Phac4g00523 626 SUPERFAMILY L domain-like 35 307 - -
Phac4g00523 626 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 14 585 - -
Phac4g00523 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Phac4g00523 626 SMART serkin_6 305 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00523 626 FunFam Putative LRR receptor-like serine/threonine-protein kinase 32 214 - -
Phac4g00523 626 ProSiteProfiles Protein kinase domain profile. 305 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00523 626 MobiDBLite consensus disorder prediction 586 608 - -
Phac4g00523 626 SUPERFAMILY Protein kinase-like (PK-like) 282 575 IPR011009 -
Phac4g00523 626 Gene3D Transferase(Phosphotransferase) domain 1 382 594 - -
Phac4g00523 626 FunFam Somatic embryogenesis receptor-like kinase 1 382 594 - -
Phac4g00523 626 Gene3D Ribonuclease Inhibitor 32 214 IPR032675 -
Phac4g00523 626 Pfam Leucine Rich Repeat 124 146 IPR001611 GO:0005515
Phac4g00523 626 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
Phac4g00523 626 Pfam Protein kinase domain 306 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00523 626 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Phac4g00523 626 Gene3D Phosphorylase Kinase; domain 1 274 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00523 Phac-Chr4 6143559 6148522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00523 21 626 Receptor kinase-like Gene Family AT5G16000 77.941 0.0 973
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Phac4g00523 Pkinase 6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00523 - - gmx:100806650 1148.27