Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00521 ATGTTGAAGGAAGGCACCAACAACGTTGGTGACAGCTCCAGCACCTGGTCACGTGTCTGCGACACGTGCCGGTCAGCGCCATGCATAGTGTACTGCCATGCAGACTCAGCATACCTGTGTTCATCCTGTGATGCTCGTGTCCATGCAGCTAACCGCGTGGCCTCAAGGCACGAGCGTGTGTGGGTGTGTGAAGCGTGTGAACGTGCTCCCGCAGCGTTTCTTTGCAAAGTTGACGCAGCTTCTCTTTGTTCTTCTTGTGATGCTGAGATTCACTCAGCAAACCCTCTAGCCAGCCGCCACCACCGTTTCCCCGTTCTCCCCATCTTGGGTCCCCTCTTGGGAGAACCAGATCACGAACCGGAACACAGATTCGTGAACGTGGTGGAAGAGGAAGAGGAAGAGTTTTCTTATGAGTATGACGATGAGATTGAAGCTGCTTCGTGGTTGTTGCCACATCCTGTGAAAGGCAACGAAGAGGAGGAGAATGGTTTTATGTACAGTAATGAATATTTGGAGAACCTTGTGGATTGTAACTCGTGCGGTCACAATAATAACCAGTTTAGCAACGTTTTTCAGCACCAACAGAACTACAACACTGTCCCTCAGAACTATGCAGTGGTTCCAGTTCAGGTGCTGCAACAATCGCAGCATTTTCAACCGGGTTTGGAGTTTGACTCATCAAAAGCTGGTTTCAGTTACGATGGTTCTCTTAGCCAAAGTGTATCAGTTTCATCAATGGAAGTTGGTGTAGTCCCAGAATCAACAATAAGTGACATCTCAGTGTCGTATTCAAAGTCACCAATAGGGACAAGTGAACTATTTCCTCCCCTTCCCATGCCTTCACATCTTACACCAATGGACAGAGAGGCCAGAGTCCTAAGATACAGGGAGAAAAAGAAGACAAGAAAGTTTGAAAAGAAAATAAGGTATGCCTCAAGGAAGGCTTATGCAGAAACTAGACCACGCATCAAGGGTAGATTTGCAAAGAGAACTGATGTGGAAGCTGAAGTGGACCAAATGCTCTCCAAAACACTATTCAATGAAGTTGGTGGTACAATTTTCCATCTTTCCAGGAATGGAAAGAAAAGAAGTTATCAATAG 1101 0.4668 MLKEGTNNVGDSSSTWSRVCDTCRSAPCIVYCHADSAYLCSSCDARVHAANRVASRHERVWVCEACERAPAAFLCKVDAASLCSSCDAEIHSANPLASRHHRFPVLPILGPLLGEPDHEPEHRFVNVVEEEEEEFSYEYDDEIEAASWLLPHPVKGNEEEENGFMYSNEYLENLVDCNSCGHNNNQFSNVFQHQQNYNTVPQNYAVVPVQVLQQSQHFQPGLEFDSSKAGFSYDGSLSQSVSVSSMEVGVVPESTISDISVSYSKSPIGTSELFPPLPMPSHLTPMDREARVLRYREKKKTRKFEKKIRYASRKAYAETRPRIKGRFAKRTDVEAEVDQMLSKTLFNEVGGTIFHLSRNGKKRSYQ* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00521 366 ProSiteProfiles CCT domain profile. 288 330 IPR010402 GO:0005515
Phac4g00521 366 Pfam B-box zinc finger 60 101 IPR000315 GO:0008270
Phac4g00521 366 CDD Bbox1_BBX-like 19 62 - -
Phac4g00521 366 Pfam CCT motif 288 330 IPR010402 GO:0005515
Phac4g00521 366 ProSiteProfiles Zinc finger B-box type profile. 58 105 IPR000315 GO:0008270
Phac4g00521 366 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 20 343 IPR045281 GO:0009909
Phac4g00521 366 ProSiteProfiles Zinc finger B-box type profile. 15 62 IPR000315 GO:0008270
Phac4g00521 366 SMART bboxneu5 63 105 IPR000315 GO:0008270
Phac4g00521 366 SMART bboxneu5 15 62 IPR000315 GO:0008270
Phac4g00521 366 CDD Bbox1_BBX-like 62 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00521 Phac-Chr4 6128181 6130472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00521 1 353 C2C2-CO-like Transcription Factor Family AT3G02380 52.547 1.72e-114 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Phac4g00521 CCT 1.5e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00521 - K12135 gmx:100782635 566.614