Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00519 ATGGCACAGAGATCCTTCTCTTCCTCCAGGAATCCATGGCGTTATGATGTCTTTCTAAATTTTAGAGGTGAAGATACTCGTTCACAGTTTACATATAATCTTTACAATTCGTTGTGCGAAAAGGGGATTCTTACTTTCTTCGACGATGATGGTCTTTTAAGAGGGGAAGATATTACACCTTCTCTCTTCAACGCTATTCAAAATTCAATGATTTCCATCGTTGTCTTCTCCAAAAACTATGCATCTTCAACCTATTGCTTAAACGAACTTGTAAAGATACTTGAATGCGCGAAGGAAGAAGGCCGATCGATCTATCCAATATTTTATGAGGTGGATCCATCACAAGTTCGACATCAGACTGGAACTTATGCAGAAGCATTGTCAAAACACGAAGCTAGGTTCCACACTGAGGCTGACAATGAGAAGCCACAAAAATGGAGGAAGGCTTTACATGAAGCAGCTAATCTATCCGGCTGGCATTTCCAACATGGGTCTCAACAACCAGAATATGAGTTTATCAGAAAGATTGTTGAAGAGATATCTGAAAAGATAAATTACATCCCTTTACATGTTGCTGATAATCCAATTGGGCTGGAGTATGCAGTGCAAGGAGTGAAATCACTCCTTGGAGATGGGTCTGATGTCAACATGGTTGGAATTTATGGTATCGGGGGTATAGGTAAAACCACGATTGCTCGTGCTGTGTATAATTGTCTTTTTTGGCAATTTCAAGGTTCCTGTTTTCTACCTGACATTAGAGAAAATACAATTAATAAGCATGGGATTGTGCGACTCCAAGAAATACTACTTTCTGAAACACTCAAAGAAGAAGATATTAAAGTGGGAGATGTCAATAGAGGAATACAGATAATAAAAAGGAGACTTCAACAGAAGAAGGTCCTTTTAGTTCTTGATGATGTTGACAAATTACAGCAGTTAAAGGCACTTGCAGGGGGACATGATTGGTTTGGCTCTGGAAGTACAATCATCATCACCACAAGAGACAAGTACTTGCTAGATGCTCATGGGGTGGTAAACCTGTATGAGGCTAAGCCTTTAAATGTTGAAAAAGGTATTGAATTGTTTAACTGGCATGCCTTCAAAAAGGGAAAAGTTGGTCCAGCTTATACGAATATTTCCAACCGTGCAGTTTCTTATGCGTGCGGACTTCCGTTGGCTCTGGAAGTTATAGGATCTCACTTATTTGGAAAAAGTTTAGAACAGTGCACTTCTGCATTAGATAAATATGAAAGTATTCCTCATGAGAAGATTCATGAAATACTTAAAGTAAGCTACGATGGTTTGGAAGAAAATGAGAAGGGAATTTTCCTGGACATTGCTTGTTTCTTCAATACCTGTGAACTGGGCAATGTCACACCAATTCTAGAAGCTCATGGTTTTTATGTAGAAGATGGTTTGAGAGTGTTGGTTGACAGATCTCTCATAAAGATTGATTCTTCTGGTTTTGTGAGAATGCATGATCTAATTCTAGACACAGGTAGAGAAATTGTAAGGCAGGAATCAACACTTGAGCCAGGCAGACGTAGTAGATTATGGTTTAACGAGGACATTGTTCATGTTTTGGAAGAAAATACGGGATCTGATAAAATAGAATTCATAAAGCTTGAAGGGCACAACAACATAGAAGTGCAATGGAATGGAAAGGCATTCAAGGAAATGAAGAACTTGAGAATTTTGATCATTGAAGATTCAACCTTTTCTACTGGCCCTAAGCATCTACCAAATAGCCTGAGAGTGCTAGACTGGAGTTGCTATCCTTCACCATCTTTACCTTCTGATTTCAATCCCAAACGTTTTGAGATACTCCTTATGCCTGAAAGTTGCCTTCAGATATTCAAACCAGAAAAGATGTTGTTGGGATCATTGTCTATAATAAACCTTGAAGATTGCAAGTTCTTAACGGATCTACCGAGCCTACGAGAAGCACCACTCTTAACAACTCTGCGTCTAGATAAATGCTCTAATTTGGTTAACATTGATGAATCAATTGGGTTTCTTGATAAGCTTCGCTTCTTGAGTGCTCAAAAGTGCACCAAGCTGAAAACTCTTGCACCCTGCATCATGCTGACATCTCTTGAAACTTTGGATCTTCGGAGGTGCGAAAGTCTTGAGAGTTTCCCAGAAGTATTGGGAAAGATGGAGAAAATAAGGACAATATATTTAGACAGCACAAATATAGACAAATTGCCATTTTCAATTAGAAATTTTGTTGGGCTTGAACTGCTGTCCTTGAAGGGTTGCCCAAGACTTTATCAGCTACCAGATAGTATAAGCATGATTCGGAATGTTAAGGTGTTAGTGGGTTATGGGCATGGAACATATCAAAATTTTGAAGAGTTGAGCTCAGAGGTGTCTGAAAGGGCCATGCTTATTGACGGTGATGACCAATATCTTGATGTGTATTATTCATACATAAGTCCCAATAATGCCATCAAAGTATGCAGTCCTAATCCTATTATGCATTCTGATTTCCGTTTGTTATTCCGAGAGCTTAGAGCGGAAGAGGAGCACGTTCGCAGGGAATCATCGATTCATTTCTCGTTTCGAAACAAATTTCCTAAGATAGCGGTATGTTGTTTAACATCAGCGGTTTTCCGGAAAAGTTTGATGGCATTGAATTTCAAGTTCAGAGTATTCATTAACGATAGTATGCAATTCATTGCTCTGAGCAATTTCATAGAAAGAGACATGGAAACAATACTTTGGTGTGATGTAGAAAGCAAAGTGGAGGGGGTGTTTTCAGAGCAAGAGTGGAATAAAGTTGAGATTGTATTTGAGTTAGGCTTCCCTCTGCAAAGAAATCGTGGAAATGAGAGCGCAACATGGAGCTTTCTTAGAGGAAGTCTAACTTGGAGTCTAATCGGTGTGTATGAAGAAGGAAATAACAAGGAGGATATTAAATTCAAAGATCCCATGTCAATTTTTCCATTACGTAACATACAACCTTCTTCTTCATTACCTACTTCTTTGTACTATGTCGTAGTATAG 3009 0.3882 MAQRSFSSSRNPWRYDVFLNFRGEDTRSQFTYNLYNSLCEKGILTFFDDDGLLRGEDITPSLFNAIQNSMISIVVFSKNYASSTYCLNELVKILECAKEEGRSIYPIFYEVDPSQVRHQTGTYAEALSKHEARFHTEADNEKPQKWRKALHEAANLSGWHFQHGSQQPEYEFIRKIVEEISEKINYIPLHVADNPIGLEYAVQGVKSLLGDGSDVNMVGIYGIGGIGKTTIARAVYNCLFWQFQGSCFLPDIRENTINKHGIVRLQEILLSETLKEEDIKVGDVNRGIQIIKRRLQQKKVLLVLDDVDKLQQLKALAGGHDWFGSGSTIIITTRDKYLLDAHGVVNLYEAKPLNVEKGIELFNWHAFKKGKVGPAYTNISNRAVSYACGLPLALEVIGSHLFGKSLEQCTSALDKYESIPHEKIHEILKVSYDGLEENEKGIFLDIACFFNTCELGNVTPILEAHGFYVEDGLRVLVDRSLIKIDSSGFVRMHDLILDTGREIVRQESTLEPGRRSRLWFNEDIVHVLEENTGSDKIEFIKLEGHNNIEVQWNGKAFKEMKNLRILIIEDSTFSTGPKHLPNSLRVLDWSCYPSPSLPSDFNPKRFEILLMPESCLQIFKPEKMLLGSLSIINLEDCKFLTDLPSLREAPLLTTLRLDKCSNLVNIDESIGFLDKLRFLSAQKCTKLKTLAPCIMLTSLETLDLRRCESLESFPEVLGKMEKIRTIYLDSTNIDKLPFSIRNFVGLELLSLKGCPRLYQLPDSISMIRNVKVLVGYGHGTYQNFEELSSEVSERAMLIDGDDQYLDVYYSYISPNNAIKVCSPNPIMHSDFRLLFRELRAEEEHVRRESSIHFSFRNKFPKIAVCCLTSAVFRKSLMALNFKFRVFINDSMQFIALSNFIERDMETILWCDVESKVEGVFSEQEWNKVEIVFELGFPLQRNRGNESATWSFLRGSLTWSLIGVYEEGNNKEDIKFKDPMSIFPLRNIQPSSSLPTSLYYVVV* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00519 1002 Gene3D - 353 436 IPR042197 -
Phac4g00519 1002 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 186 - -
Phac4g00519 1002 SUPERFAMILY L domain-like 542 774 - -
Phac4g00519 1002 ProSiteProfiles TIR domain profile. 13 184 IPR000157 GO:0007165
Phac4g00519 1002 SMART till_3 14 156 IPR000157 GO:0007165
Phac4g00519 1002 Pfam TIR domain 15 185 IPR000157 GO:0007165
Phac4g00519 1002 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 159 IPR035897 -
Phac4g00519 1002 Gene3D - 185 345 IPR027417 -
Phac4g00519 1002 Pfam NB-ARC domain 200 427 IPR002182 GO:0043531
Phac4g00519 1002 PRINTS Disease resistance protein signature 294 308 - -
Phac4g00519 1002 PRINTS Disease resistance protein signature 387 401 - -
Phac4g00519 1002 PRINTS Disease resistance protein signature 694 710 - -
Phac4g00519 1002 PRINTS Disease resistance protein signature 217 232 - -
Phac4g00519 1002 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 446 IPR027417 -
Phac4g00519 1002 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 783 IPR044974 GO:0006952
Phac4g00519 1002 SUPERFAMILY "Winged helix" DNA-binding domain 423 529 IPR036390 -
Phac4g00519 1002 Gene3D Ribonuclease Inhibitor 520 813 IPR032675 -
Phac4g00519 1002 Gene3D - 12 184 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00519 Phac-Chr4 6084337 6087927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00519 6 788 WRKY Transcription Factor Family AT4G12020 33.045 9.67e-97 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00519 - - pvu:PHAVU_004G046400g 1507.66