Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00517 ATGTCAATGCCCTTTCTTACAAACATTGACCGCGTTGAGATGCTTCTCAATGCATCCAGCACTGTTAGTGCATCGCATAAAAGATGGCACTCTGCATTCATGGCCATCTATTGCTCCCGAGCTATCATGTCACTCTCCACTCGCAACAAAACACACAAAATCAAAGCAAAAGTCTCACCTACACCAACACCGCCACCATCTTTCGTCACGGTTGATTTGATTCCTAACCATTCCTTTGGTATTGACCAAACAGCCCTCACGGATATTGTCAAAGAAAAAGACCTTAAGAACCTTGATAGAATTGGTAGAGTTGAAGGGGTGGCAACAGCCCTTGAAACCCACGTTGAGTATGGCATCAAAGGTGGTGATGATGATGGTGAAGACGTCACACGTAGAAGACAAGTGTTTGGTTCCAACACTTACCAAAAGCCACCTTCCAAAGGGTTCTTCCACTTTGTGGTGGAAGCCTTTAAGGATGTCACTATTCTCATCCTTTTGGCTTGTGCTGCTCTTTCCCTTGGCTTTGGAATCAAGGAGCATGGAATCAAAGAAGGTTGGTACGATGGTGGAAGCATCTTTGTTGCAGTGTTCATTGTGATTTCCTTGTCAGCTGTGAGCAACTTCAGACAGAACAGACAGTTTGACAAGCTGTCTCAGCTGAGCAATGACATACAAATTGAAGTGGTGAGAAGTGGGAGGCGACAACATGTGTCAATCTTTGAGATAGTGGTCGGTGATGTCATTTGCTTGAAGATTGGGGATCAAGTGCCAGCAGATGGGTTGTTCATAGAAGGGCATTCACTTAGAGTGGATGAATCAAGCATGACAGGGGAGAGTGATCATGTTGAGATTAGTAGACAGCACCGTCCTTTTTTATTCTCAGGCACCAAGGTGGCTGAAGGGTATGCGAAGATGCTTGTTACCTCAGTTGGTATGAGCACAACATGGGGCCAAATGATGAGTTCAATAAGCCGAGATATTGATGAGCAAACTCCTTTGCAAGAGAGGCTAAACAGGCTCACATCGTCAATTGGAAAGGTTGGTTTGGCTGTGGCTTTTCTTGTCCTTGTTGTTTTGTTGGTTAGGTACTTCACAGGGAACACAAAGGATGACAATGGGGTCAGAGAGTTCAATGGAAGCAAGACCAAGTTTGATGATATAATGAATGCTGTTGTGGGAATTATTGCTGATGCAGTTACCATTGTTGTTGTTGCAATCCCTGAGGGTCTTCCATTAGCTGTGACTCTCACTCTGGCTTATTCAATGAAGAAAATGATGGCTGACCATGCAATGGTGAGAAAGCTCTCAGCATGTGAGACAATGGGTTCTGCCACCACAATTTGTACAGATAAGACTGGCACTCTCACACTCAATGAGATGAAAGTGACCAAGTTCTGGCTTGGCCTAGAACCTGTGGCGGAAACTAAAAATGCTAACTCAAAGGTTGCTCCATTTGTTCTTCAACTTATCCAAGAAGGGGTGGCTCTAAACACAACTGGCAGTGTGCACAAGTCCAATAAATCAGGTTCTGAATTTGAGTTTTCAGGTAGTCCCACAGAAAAAGCTATCCTATCTTGGGCAGTTTTGGAGTTGAACATGGAGACGGAGGACTTGACAAAAGGCTGTTCCATCATTCATGTTGAGACCTTCGACTCAAAGAAGAAAAAAAGTGGAGTTTTGTTGAGAAGGAAGGCAGACAACACGGTTTGTGCTCACTGGAAAGGAGCAGCTGAGATGGTACTAAAGATGTGCTCAAGATACTATGATGCTTCTGGCATTGTGAAAGATCTTGACAATGATAAAATGTTGAAGTTTGAACACATCATTCAAGGTATGGCAGCTAGTAGTCTTCGTTGCATTGCTTTTGCCCATGTAGAAGTAGCTGAGGAAGAGCTTGGAGATGAAGACACAATGATGAAAGTGAAAGACAGTGGTTTAACATTGTTAGGGCTTGTTGGGATTAAGGATCCATGTCGTCCAGGGGTGAAGAAGGCTGTGGAAGCTTGTCAAAATGCTGGTGTGAATGTAAAAATGATCACAGGAGACAATGTTTTCACTGCAAAAGCTATAGCAAGCGAATGTGGCATACTCAGGCCAAATCAGGACACAGCTGGAGCAGTGATTGAAGGAGAGGAATTTCGCAACTACACACCTGAAGAGAGGTTGGAGAAGGTGGACAATATCTGCGTGATGGCTAGATCTTCTCCTTTTGACAAACTTCTAATGGTTCAATGTCTGAAGCAAAAAGGCCATGTAGTTGCTGTCACTGGGGATGGCACAAACGATGCACCAGCACTGAAAGAAGCTGACATTGGACTCTCTATGGGAATTCAAGGGACTGAAGTGGCCAAAGAGAGCTCAGACATTGTTATATTGGATGACAATTTTGAATCTGTGGTCACTGTCTTAAGGTGGGGAAGGTGTGTTTACAACAACATCCAGAAGTTCATTCAGTTTCAATTGACAGTGAATGTTGCAGCACTTGCTATCAACTTTGTGGCAGCAGTGTCAGCTGGGGAAGTGCCACTCACAGCAGTACAATTGTTATGGGTGAACTTGATCATGGACACATTAGGTGCTTTGGCTCTAGCAACAGAAAAACCTACCAATGAATTGATGGACAAACCACCAGTGGGTAGAACAAAACCTCTCATCACCAATGTCATGTGGAGGAATCTATTGGCTCAAGCTTTGTACCAGATAGCAGTTTTGCTGACTCTTCAATTCAAAGGTGAGTCCATCTTTGGTGTGACATCAGGGGTAAATGACACATTGATTTTCAACACATTTGTTCTCTGCCAAGTGTTCAATGAGTTCAATGCAAGGAAGATGGAGAAGAGGAATGTATTCAAAGGCATACACAGGAGCAAGTTGTTTTTAGGCATTATTGGCATAACAATAATCCTTCAGGTTGTTATGGTTGAGTTTCTCAAGAAATTTGCTGATACAGAGAGGCTAAATTGGGGGCAATGGGCTCTCTGCATTGGTCTAGCTGCAGTTTCCTGGCCAATTGGTTGGGTTGTGAAGTTGATACCTGTCCCAGATAAACCATTGCTCAATTTTTTCAGAATCAAGAAATGA 3081 0.4356 MSMPFLTNIDRVEMLLNASSTVSASHKRWHSAFMAIYCSRAIMSLSTRNKTHKIKAKVSPTPTPPPSFVTVDLIPNHSFGIDQTALTDIVKEKDLKNLDRIGRVEGVATALETHVEYGIKGGDDDGEDVTRRRQVFGSNTYQKPPSKGFFHFVVEAFKDVTILILLACAALSLGFGIKEHGIKEGWYDGGSIFVAVFIVISLSAVSNFRQNRQFDKLSQLSNDIQIEVVRSGRRQHVSIFEIVVGDVICLKIGDQVPADGLFIEGHSLRVDESSMTGESDHVEISRQHRPFLFSGTKVAEGYAKMLVTSVGMSTTWGQMMSSISRDIDEQTPLQERLNRLTSSIGKVGLAVAFLVLVVLLVRYFTGNTKDDNGVREFNGSKTKFDDIMNAVVGIIADAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADHAMVRKLSACETMGSATTICTDKTGTLTLNEMKVTKFWLGLEPVAETKNANSKVAPFVLQLIQEGVALNTTGSVHKSNKSGSEFEFSGSPTEKAILSWAVLELNMETEDLTKGCSIIHVETFDSKKKKSGVLLRRKADNTVCAHWKGAAEMVLKMCSRYYDASGIVKDLDNDKMLKFEHIIQGMAASSLRCIAFAHVEVAEEELGDEDTMMKVKDSGLTLLGLVGIKDPCRPGVKKAVEACQNAGVNVKMITGDNVFTAKAIASECGILRPNQDTAGAVIEGEEFRNYTPEERLEKVDNICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFESVVTVLRWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTNELMDKPPVGRTKPLITNVMWRNLLAQALYQIAVLLTLQFKGESIFGVTSGVNDTLIFNTFVLCQVFNEFNARKMEKRNVFKGIHRSKLFLGIIGITIILQVVMVEFLKKFADTERLNWGQWALCIGLAAVSWPIGWVVKLIPVPDKPLLNFFRIKK* 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00517 1026 Pfam E1-E2 ATPase 225 426 - -
Phac4g00517 1026 SUPERFAMILY HAD-like 446 861 IPR036412 -
Phac4g00517 1026 SUPERFAMILY Calcium ATPase, transmembrane domain M 103 1013 IPR023298 -
Phac4g00517 1026 PRINTS H+-transporting ATPase (proton pump) signature 788 813 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac4g00517 1026 PRINTS H+-transporting ATPase (proton pump) signature 756 772 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac4g00517 1026 PRINTS H+-transporting ATPase (proton pump) signature 605 623 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac4g00517 1026 SFLD Haloacid Dehalogenase 430 809 - -
Phac4g00517 1026 FunFam Calcium-transporting ATPase 773 1015 - -
Phac4g00517 1026 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 454 662 IPR023299 GO:0000166
Phac4g00517 1026 PANTHER CATION TRANSPORTING ATPASE 59 1013 - -
Phac4g00517 1026 Gene3D - 155 1010 - -
Phac4g00517 1026 FunFam Calcium-transporting ATPase 651 801 - -
Phac4g00517 1026 FunFam Calcium-transporting ATPase 458 657 - -
Phac4g00517 1026 SFLD p-type atpase 430 809 IPR044492 -
Phac4g00517 1026 NCBIfam calcium-translocating P-type ATPase, PMCA-type 92 1013 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Phac4g00517 1026 SMART Cation_ATPase_N_a_2 100 177 IPR004014 -
Phac4g00517 1026 Pfam Cation transporter/ATPase, N-terminus 103 172 IPR004014 -
Phac4g00517 1026 Gene3D - 458 657 IPR023299 GO:0000166
Phac4g00517 1026 Gene3D - 445 801 IPR023214 -
Phac4g00517 1026 Pfam haloacid dehalogenase-like hydrolase 445 770 - -
Phac4g00517 1026 SUPERFAMILY Calcium ATPase, transduction domain A 225 322 IPR008250 -
Phac4g00517 1026 Pfam Cation transporting ATPase, C-terminus 841 1011 IPR006068 -
Phac4g00517 1026 Gene3D - 127 324 - -
Phac4g00517 1026 PRINTS P-type cation-transporting ATPase superfamily signature 672 682 - -
Phac4g00517 1026 PRINTS P-type cation-transporting ATPase superfamily signature 271 285 - -
Phac4g00517 1026 PRINTS P-type cation-transporting ATPase superfamily signature 780 792 - -
Phac4g00517 1026 PRINTS P-type cation-transporting ATPase superfamily signature 448 462 - -
Phac4g00517 1026 PRINTS P-type cation-transporting ATPase superfamily signature 756 775 - -
Phac4g00517 1026 PRINTS P-type cation-transporting ATPase superfamily signature 650 661 - -
Phac4g00517 1026 CDD P-type_ATPase_Ca_PMCA-like 129 889 - -
Phac4g00517 1026 FunFam Calcium-transporting ATPase 200 324 - -
Phac4g00517 1026 NCBIfam HAD-IC family P-type ATPase 730 837 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac4g00517 1026 NCBIfam HAD-IC family P-type ATPase 391 475 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac4g00517 1026 ProSitePatterns E1-E2 ATPases phosphorylation site. 450 456 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00517 Phac-Chr4 6055037 6058475 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00517 12 1026 Primary Pumps ATPases AT3G22910 67.517 0.0 1328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00517 K01537 - gmx:100793918 1759.58