Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00515 ATGAGGAAACCTGATATCATGGGAAAAGACAAACTGAACACCTCCTCCACCACCACCACCACCATTAACGCCACCAACAGCACCAAGAGCAAGCTGAGGAAGGGCTTGTGGTCACCTGAGGAAGATGAGAAACTGATAAGGTACATGATCACTAAGGGACAAGGGTGCTGGAGTGACATTGCTAGGAATGCTGGCCTTCAAAGGTGCGGCAAAAGTTGTCGTCTTCGTTGGATCAACTACTTGAGACCTGATCTCAAACGTGGTGCATTTTCACCCCAAGAGGAAGAACTCATCATTCATTTGCACTCCATTCTTGGAAATAGATGGTCTCAGATTGCTGCACGTCTCCCTGGTCGCACAGACAATGAAATAAAGAATTTTTGGAACTCCACACTGAAGAAAAGGTTGAAAATGAGCAACAACAACAGCACTTCATCACCAAACAACAGTGACTCATCAGACCCTAGAGATGTCATGGGGGGGATGATGCCAATGAATGAGCATGACCTCATGACCATGTGCATGGACTCCTCCTCATCAACATCATCATCATCCATGCAGTCCATGCAAGCCAACATGGCACTAACTGACCAATTTGACCCTTTTCCCTTGTTGTCCAACCGTTATGACATGACCACCGGTGCAGCCGGTTTCCTTGACAACATGGCTGCATGCTTAACCCAAGTTGGTATGGTAGATCATGATCATGATGATGGGGTTGTTCATGGTGATTATGGGGCATTGGAACCTAATAAAATGGGGTTAGAAAGCGACTTTTCCCTTCCTCCACTAGAAAGTAGAAGCATTGAGGACAATTCTACAACCTCAATTGATGTGAAAACCCATAACAACAACCACTTCAAGAATAGTTGCTTCAATAACACTGATCATCATATTCAAACCTCCAACAACGTTGTTGCAGAGGACATGTTTGGCTTTGGAAATCATGGGCAAGGGGAAAACTTTAGAATGGGAGAATGGGACTTTGAGGGTTTGATGCAAGACATGTCCTATTTCCCTTCCCTTGATTTCCAAGTTTAA 1041 0.4476 MRKPDIMGKDKLNTSSTTTTTINATNSTKSKLRKGLWSPEEDEKLIRYMITKGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIIHLHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRLKMSNNNSTSSPNNSDSSDPRDVMGGMMPMNEHDLMTMCMDSSSSTSSSSMQSMQANMALTDQFDPFPLLSNRYDMTTGAAGFLDNMAACLTQVGMVDHDHDDGVVHGDYGALEPNKMGLESDFSLPPLESRSIEDNSTTSIDVKTHNNNHFKNSCFNNTDHHIQTSNNVVAEDMFGFGNHGQGENFRMGEWDFEGLMQDMSYFPSLDFQV* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00515 346 FunFam MYB transcription factor 31 87 - -
Phac4g00515 346 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 81 IPR017930 -
Phac4g00515 346 MobiDBLite consensus disorder prediction 1 22 - -
Phac4g00515 346 SUPERFAMILY Homeodomain-like 32 128 IPR009057 -
Phac4g00515 346 SMART sant 86 134 IPR001005 -
Phac4g00515 346 SMART sant 33 83 IPR001005 -
Phac4g00515 346 MobiDBLite consensus disorder prediction 138 155 - -
Phac4g00515 346 FunFam Transcription factor MYB46 88 158 - -
Phac4g00515 346 Gene3D - 31 87 - -
Phac4g00515 346 ProSiteProfiles Myb-like domain profile. 29 81 IPR001005 -
Phac4g00515 346 CDD SANT 37 81 IPR001005 -
Phac4g00515 346 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 82 136 IPR017930 -
Phac4g00515 346 Gene3D - 88 159 - -
Phac4g00515 346 MobiDBLite consensus disorder prediction 138 163 - -
Phac4g00515 346 ProSiteProfiles Myb-like domain profile. 82 132 IPR001005 -
Phac4g00515 346 Pfam Myb-like DNA-binding domain 87 131 IPR001005 -
Phac4g00515 346 Pfam Myb-like DNA-binding domain 34 81 IPR001005 -
Phac4g00515 346 PANTHER MYB DOMAIN PROTEIN 55 27 300 - -
Phac4g00515 346 CDD SANT 89 132 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00515 Phac-Chr4 6036240 6040215 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00515 1 346 MYB Transcription Factor Family AT3G08500 46.277 7.99e-83 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac4g00515 Myb_DNA-binding 5.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00515 K09422 - gmx:100813660 525.783