LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac4g00505	ATGAGGAGTGGAAGTGTTGCACCTGAGGCAGAGGAGCAAAAATCAAGAAGGAACAAGAGAGTTGTTGATGAGAATGCTCCTTTGATACCAAAGGTTCAGGGGAGTGATGCTGAAGGGTTTGATGAGTTTAATGGAGCTTCATTTTGTGGGGCAGTTTTCAACTTGTCCACCACAATTATTGGTGCTGGGATCATGGGATTGCCAGCATGTGTGAAAAAGTTGGGGATGGTGCCTGGTCTTCTTGCTATAATCTTAACAGGTTTATTGACAGAGAAGTCAATTGAGTTCATGATTAGGAACTCCAGGGCAGGGAATCTTTCCTCTTATGGGAGTCTCATGGGTGATGCGTTTGGGAAATATGGGAAAGCTTTGGTGCAGATATGTGTTATAGTCAACAACATTGGTGTCTTGATTGTTTACATGATTATAATTGGGGATGTGATTTCTGGAACATCTTCTGGTGGAACTCACCATTCTGGTGTCCTTGAAGGATGGTTTGGAGTCCACTGGTGGACTGGCAGAACGTTTGTTGTTTCGTTTACAACAGTTGCTGTGTTTGCACCTTTGGTCAGCTTTAAGAGAATTGATTCATTGAAATTTACATCTGCATTATCAGTTGGGCTAGCAGTAGTTTTTCTAGTAATTGCTGTTGGAATCTCAATCTTCAAGATCATAATTGGAGGCATTGGGATGCCCAGACTCTTCCCAATCATTACGGATCTGACATCAATTTTGGAACTGTTCACAGTAGTTCCTGTGCTTGTGACTGCCTATATCTGCCACTACAACGTTCACAGCATAGATAATGAACTTGAGGACTCCTCTCAGATGCATGGCGTTGTACGTACGTCCCTTGCTCTATGTGCTTCAGTGTACTTACTCACAAGCTTCTTTGGGTTCCTCCTATTTGGTGAAGGAACACTTGATGATGTGCTTGCAAATTTTGACGCTGATCTTGGAATTCCTTTGGGTTCTGTGCTGAATGATGCAGTTCGTTTCAGCTATGCTGCACATCTTGTGCTTGTATTTCCAATTGTCTTCTATGGAATGCGTGTGAACCTAGATGGTCTCTTATTTCCATCATCTAGGCCTTTGAGTCAAGACAAATTCAGATTTGCATCAATTACTATCTCAATTATTGCTGTTATCTTTCTGGGAGCAAATTTCATTCCCAGCATTTGGGATATTTTCCAGTTTACTGGAGCAACAGCTGCTGTTTGTGTAGCATTCATATTTCCAGCTGCCATCATTCTTGGGGATCGACACAAGATAGCAACTAAAAAGGACAAGATTTTATCTGTCTTTATGATAGTCTTGGCTGTGTTGTCAAATGCAGTGGCTATATACAGTGATACTTATGCCTTGATCAAGAAGAACAAAACTAATACATGA	1392	0.4145	MRSGSVAPEAEEQKSRRNKRVVDENAPLIPKVQGSDAEGFDEFNGASFCGAVFNLSTTIIGAGIMGLPACVKKLGMVPGLLAIILTGLLTEKSIEFMIRNSRAGNLSSYGSLMGDAFGKYGKALVQICVIVNNIGVLIVYMIIIGDVISGTSSGGTHHSGVLEGWFGVHWWTGRTFVVSFTTVAVFAPLVSFKRIDSLKFTSALSVGLAVVFLVIAVGISIFKIIIGGIGMPRLFPIITDLTSILELFTVVPVLVTAYICHYNVHSIDNELEDSSQMHGVVRTSLALCASVYLLTSFFGFLLFGEGTLDDVLANFDADLGIPLGSVLNDAVRFSYAAHLVLVFPIVFYGMRVNLDGLLFPSSRPLSQDKFRFASITISIIAVIFLGANFIPSIWDIFQFTGATAAVCVAFIFPAAIILGDRHKIATKKDKILSVFMIVLAVLSNAVAIYSDTYALIKKNKTNT*	464

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac4g00505	463	Pfam	Transmembrane amino acid transporter protein	46	448	IPR013057	-
	Phac4g00505	463	PANTHER	AMINO ACID TRANSPORTER	42	443	-	-
	Phac4g00505	463	MobiDBLite	consensus disorder prediction	1	20	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac4g00505	Phac-Chr4	5919602	5923670	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac4g00505	4	459	Amino Acid or Auxin Permease AAAP Family	AT3G30390	66.886	0.0	608

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac4g00505	K14207		-	gmx:100791286	775.393